Information for 5-GGRAGCACTTTGT (Motif 11)

A C T G A C T G C T A G C T G A A C T G A G T C C G T A A G T C A C G T A G C T C G A T A C T G C G A T
Reverse Opposite:
C G T A A G T C C G T A C T G A C G T A C T A G A C G T T A C G A G T C A G C T A G T C G T A C A G T C
p-value:1e-10
log p-value:-2.361e+01
Information Content per bp:1.836
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.9 +/- 28.9bp
Average Position of motif in Background66.7 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GGRAGCACTTTGT-
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C T G A C T G C T A G C T G A A C T G A G T C C G T A A G T C A C G T A G C T C G A T A C T G C G A T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGRAGCACTTTGT
--AAGCACTTAA-
 A C T G A C T G C T A G C T G A A C T G A G T C C G T A A G T C A C G T A G C T C G A T A C T G C G A T
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.65
Offset:7
Orientation:forward strand
Alignment:GGRAGCACTTTGT
-------CTTTGT
 A C T G A C T G C T A G C T G A A C T G A G T C C G T A A G T C A C G T A G C T C G A T A C T G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGRAGCACTTTGT
-AGGVNCCTTTGT
 A C T G A C T G C T A G C T G A A C T G A G T C C G T A A G T C A C G T A G C T C G A T A C T G C G A T
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGRAGCACTTTGT
GGGAGGACNG---
 A C T G A C T G C T A G C T G A A C T G A G T C C G T A A G T C A C G T A G C T C G A T A C T G C G A T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGRAGCACTTTGT-
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C T G A C T G C T A G C T G A A C T G A G T C C G T A A G T C A C G T A G C T C G A T A C T G C G A T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGRAGCACTTTGT-----
---TGGACTTTGNNCTCN
 A C T G A C T G C T A G C T G A A C T G A G T C C G T A A G T C A C G T A G C T C G A T A C T G C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GGRAGCACTTTGT------
---TGGACTTTGNNCTNTG
 A C T G A C T G C T A G C T G A A C T G A G T C C G T A A G T C A C G T A G C T C G A T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PH0117.1_Nkx3-1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGRAGCACTTTGT-
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C T G A C T G C T A G C T G A A C T G A G T C C G T A A G T C A C G T A G C T C G A T A C T G C G A T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGRAGCACTTTGT------
--TNNTCCTTTGTTCTNNT
 A C T G A C T G C T A G C T G A A C T G A G T C C G T A A G T C A C G T A G C T C G A T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T