Information for 10-GGCTATTTCC (Motif 16)

A T C G A T C G T G A C G A C T G T C A C A G T A C G T G A C T G T A C A G T C
Reverse Opposite:
A C T G A C T G C T G A G T C A G T C A A C G T C T G A A C T G T A G C T A G C
p-value:1e-8
log p-value:-2.029e+01
Information Content per bp:1.692
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.78%
Number of Background Sequences with motif1278.5
Percentage of Background Sequences with motif2.70%
Average Position of motif in Targets56.3 +/- 27.0bp
Average Position of motif in Background51.4 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGCTATTTCC
GGGAATTTCC
 A T C G A T C G T G A C G A C T G T C A C A G T A C G T G A C T G T A C A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGCTATTTCC
GGGGATTTCC
 A T C G A T C G T G A C G A C T G T C A C A G T A C G T G A C T G T A C A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGCTATTTCC
GGGAATTTCC
 A T C G A T C G T G A C G A C T G T C A C A G T A C G T G A C T G T A C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.67
Offset:4
Orientation:forward strand
Alignment:GGCTATTTCC----
----ATTTCCTGTN
 A T C G A T C G T G A C G A C T G T C A C A G T A C G T G A C T G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GGCTATTTCC---
---ATTTTCCATT
 A T C G A T C G T G A C G A C T G T C A C A G T A C G T G A C T G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGCTATTTCC----
--NNAYTTCCTGHN
 A T C G A T C G T G A C G A C T G T C A C A G T A C G T G A C T G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGCTATTTCC-----
--TTACTTCCTNGTN
 A T C G A T C G T G A C G A C T G T C A C A G T A C G T G A C T G T A C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGCTATTTCC-
NGGGGATTTCCC
 A C G T A T C G A T C G T G A C G A C T G T C A C A G T A C G T G A C T G T A C A G T C A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGCTATTTCC---
---ATTTTCCATT
 A T C G A T C G T G A C G A C T G T C A C A G T A C G T G A C T G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGCTATTTCC
GGGGATTTCC
 A T C G A T C G T G A C G A C T G T C A C A G T A C G T G A C T G T A C A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C