Information for 3-GTACAGTACATTT (Motif 7)

C T A G A G C T T C G A T G A C C G T A C A T G A G C T T G C A A G T C T G C A A C G T C G A T A C G T
Reverse Opposite:
C G T A C G T A T G C A A C G T C T A G A C G T T C G A G T A C C G A T A C T G A G C T C T G A A G T C
p-value:1e-10
log p-value:-2.523e+01
Information Content per bp:1.724
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 20.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0084.1_Irx3_2/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTACAGTACATTT-----
-NNTATTACATGTANNNT
 C T A G A G C T T C G A T G A C C G T A C A T G A G C T T G C A A G T C T G C A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GTACAGTACATTT-
GGCAAAAGTCCAATAA
 A C G T A C G T C T A G A G C T T C G A T G A C C G T A C A T G A G C T T G C A A G T C T G C A A C G T C G A T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GTACAGTACATTT
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T C T A G A G C T T C G A T G A C C G T A C A T G A G C T T G C A A G T C T G C A A C G T C G A T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PH0087.1_Irx6/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GTACAGTACATTT------
--AAAATACATGTAAAAAT
 C T A G A G C T T C G A T G A C C G T A C A T G A G C T T G C A A G T C T G C A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTACAGTACATTT-----
-ANTATTACATGTANNNN
 C T A G A G C T T C G A T G A C C G T A C A T G A G C T T G C A A G T C T G C A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PH0082.1_Irx2/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GTACAGTACATTT------
--TAAATACATGTAAAATT
 C T A G A G C T T C G A T G A C C G T A C A T G A G C T T G C A A G T C T G C A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GTACAGTACATTT--
-NNCNNAACAATTNT
 C T A G A G C T T C G A T G A C C G T A C A T G A G C T T G C A A G T C T G C A A C G T C G A T A C G T A C G T A C G T
A C G T G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GTACAGTACATTT------
--AATATACATGTAAAACA
 C T A G A G C T T C G A T G A C C G T A C A T G A G C T T G C A A G T C T G C A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GTACAGTACATTT
CCAGGAACAG-------
 A C G T A C G T A C G T A C G T C T A G A G C T T C G A T G A C C G T A C A T G A G C T T G C A A G T C T G C A A C G T C G A T A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX21/MA0866.1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GTACAGTACATTT---
-AACACTACCATTGTT
 C T A G A G C T T C G A T G A C C G T A C A T G A G C T T G C A A G T C T G C A A C G T C G A T A C G T A C G T A C G T A C G T
A C G T T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T