Information for 1-TRWGTAAAYA (Motif 1)

C A G T C T A G C G A T A C T G A G C T G T C A G T C A G C T A A G T C C G T A
Reverse Opposite:
A C G T T C A G C G A T C A G T C A G T T C G A A G T C C G T A G A T C G T C A
p-value:1e-25
log p-value:-5.769e+01
Information Content per bp:1.673
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif9.66%
Number of Background Sequences with motif1075.0
Percentage of Background Sequences with motif2.27%
Average Position of motif in Targets52.5 +/- 24.2bp
Average Position of motif in Background51.0 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:TRWGTAAAYA--
TATGTAAACANG
 C A G T C T A G C G A T A C T G A G C T G T C A G T C A G C T A A G T C C G T A A C G T A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:2
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--TRWGTAAAYA---
NCWRWGTAAACANSV
 A C G T A C G T C A G T C T A G C G A T A C T G A G C T G T C A G T C A G C T A A G T C C G T A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-TRWGTAAAYA----
CAAAGTAAACANNNN
 A C G T C A G T C T A G C G A T A C T G A G C T G T C A G T C A G C T A A G T C C G T A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:4
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--TRWGTAAAYA
NCTAAGTAAACA
 A C G T A C G T C A G T C T A G C G A T A C T G A G C T G T C A G T C A G C T A A G T C C G T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.94
Offset:0
Orientation:forward strand
Alignment:TRWGTAAAYA
AAAGTAAACA
 C A G T C T A G C G A T A C T G A G C T G T C A G T C A G C T A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.94
Offset:0
Orientation:forward strand
Alignment:TRWGTAAAYA
AAAGTAAACA
 C A G T C T A G C G A T A C T G A G C T G T C A G T C A G C T A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:TRWGTAAAYA
WAAGTAAAYA
 C A G T C T A G C G A T A C T G A G C T G T C A G T C A G C T A A G T C C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXC1/MA0032.2/Jaspar

Match Rank:8
Score:0.91
Offset:0
Orientation:forward strand
Alignment:TRWGTAAAYA-
TATGTAAATAT
 C A G T C T A G C G A T A C T G A G C T G T C A G T C A G C T A A G T C C G T A A C G T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

FOXB1/MA0845.1/Jaspar

Match Rank:9
Score:0.91
Offset:0
Orientation:forward strand
Alignment:TRWGTAAAYA-
TATGTAAATAT
 C A G T C T A G C G A T A C T G A G C T G T C A G T C A G C T A A G T C C G T A A C G T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

FOXI1/MA0042.2/Jaspar

Match Rank:10
Score:0.90
Offset:3
Orientation:forward strand
Alignment:TRWGTAAAYA
---GTAAACA
 C A G T C T A G C G A T A C T G A G C T G T C A G T C A G C T A A G T C C G T A
A C G T A C G T A C G T T C A G G C A T T G C A G T C A C G T A G A T C T C G A