Information for 9-TGGCTGGAGGCSG (Motif 20)

A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T A G T A G C A T G C T A C G
Reverse Opposite:
A G T C A T C G A T C G A G T C A G T C C G A T A G T C A G T C C G T A A C T G A G T C G T A C G T C A
p-value:1e-7
log p-value:-1.755e+01
Information Content per bp:1.835
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif17.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets61.6 +/- 22.1bp
Average Position of motif in Background42.1 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGGCTGGAGGCSG
-NGCTN-------
 A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T A G T A G C A T G C T A C G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGGCTGGAGGCSG
GGGCGGGAAGG--
 A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T A G T A G C A T G C T A C G
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGGCTGGAGGCSG
GGGCGGGAAGG--
 A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T A G T A G C A T G C T A C G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGGAGGCSG
TWGTCTGV------
 A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T A G T A G C A T G C T A C G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGGCTGGAGGCSG
TGTCAGGGGGCG-
 A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T A G T A G C A T G C T A C G
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGGCTGGAGGCSG
-GGCGGGAARN--
 A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T A G T A G C A T G C T A C G
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGCTGGAGGCSG
SDGCAGGTGCNS-
 A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T A G T A G C A T G C T A C G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCTGGAGGCSG
NNTNNTGTCTGGNNTNG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T A G T A G C A T G C T A C G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGGAGGCSG
CTGTCTGG------
 A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T A G T A G C A T G C T A C G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGGCTGGAGGCSG
BTKGGCGGGAAA---
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T A G T A G C A T G C T A C G
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T