Information for 6-TTMAAGTTTAACT (Motif 13)

A C G T A C G T T G C A C G T A C G T A T C A G A C G T A C G T G A C T G T C A C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C G T C G T A C G T A C G T A A G T C A C G T C G A T A C G T T G C A C G T A
p-value:1e-9
log p-value:-2.178e+01
Information Content per bp:1.820
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.3 +/- 29.0bp
Average Position of motif in Background52.5 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTMAAGTTTAACT
TTAATGTTTAACC
 A C G T A C G T T G C A C G T A C G T A T C A G A C G T A C G T G A C T G T C A C G T A A G T C A C G T
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTMAAGTTTAACT---
----ACTTTCACTTTC
 A C G T A C G T T G C A C G T A C G T A T C A G A C G T A C G T G A C T G T C A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

HNF1A/MA0046.2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTMAAGTTTAACT
AGTTAATGATTAACT
 A C G T A C G T A C G T A C G T T G C A C G T A C G T A T C A G A C G T A C G T G A C T G T C A C G T A A G T C A C G T
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TTMAAGTTTAACT---
----ASTTTCACTTCC
 A C G T A C G T T G C A C G T A C G T A T C A G A C G T A C G T G A C T G T C A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

HNF1B/MA0153.2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTMAAGTTTAACT
GTTAATNATTAAC-
 A C G T A C G T A C G T T G C A C G T A C G T A T C A G A C G T A C G T G A C T G T C A C G T A A G T C A C G T
C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTMAAGTTTAACT-----
-ACTTAGTTAACTAAAAA
 A C G T A C G T T G C A C G T A C G T A T C A G A C G T A C G T G A C T G T C A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTMAAGTTTAACT
TTAATNATTAAC-
 A C G T A C G T T G C A C G T A C G T A T C A G A C G T A C G T G A C T G T C A C G T A A G T C A C G T
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TTMAAGTTTAACT---
------GTTAACTAGN
 A C G T A C G T T G C A C G T A C G T A T C A G A C G T A C G T G A C T G T C A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TTMAAGTTTAACT---
----ACTTTCACTTTC
 A C G T A C G T T G C A C G T A C G T A T C A G A C G T A C G T G A C T G T C A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

PH0167.1_Tcf1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTMAAGTTTAACT-----
-CCTTAGTTAACTAAAAT
 A C G T A C G T T G C A C G T A C G T A T C A G A C G T A C G T G A C T G T C A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T