Information for 7-CTGGACHGCGCCA (Motif 18)

A G T C A C G T A C T G A T C G G C T A A G T C G A C T A T C G A G T C A T C G A G T C A G T C G T C A
Reverse Opposite:
A C G T A C T G A C T G A T G C A C T G A T G C C G T A A C T G C G A T A T G C A G T C G T C A A C T G
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.6 +/- 23.3bp
Average Position of motif in Background56.5 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTGGACHGCGCCA-----
-AGCTCGGCGCCAAAAGC
 A G T C A C G T A C T G A T C G G C T A A G T C G A C T A T C G A G T C A T C G A G T C A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTGGACHGCGCCA-----
-CCTTCGGCGCCAAAAGG
 A G T C A C G T A C T G A T C G G C T A A G T C G A C T A T C G A G T C A T C G A G T C A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CTGGACHGCGCCA
----AGCGCGCC-
 A G T C A C G T A C T G A T C G G C T A A G T C G A C T A T C G A G T C A T C G A G T C A G T C G T C A
A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTGGACHGCGCCA----
-TCGACCCCGCCCCTAT
 A G T C A C G T A C T G A T C G G C T A A G T C G A C T A T C G A G T C A T C G A G T C A G T C G T C A A C G T A C G T A C G T A C G T
A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGGACHGCGCCA
GARTGGTCATCGCCC
 A C G T A C G T A G T C A C G T A C T G A T C G G C T A A G T C G A C T A T C G A G T C A T C G A G T C A G T C G T C A
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTGGACHGCGCCA-----
-TACGCCCCGCCACTCTG
 A G T C A C G T A C T G A T C G G C T A A G T C G A C T A T C G A G T C A T C G A G T C A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGGACHGCGCCA-
NNGCNCTGCGCGGC
 A G T C A C G T A C T G A T C G G C T A A G T C G A C T A T C G A G T C A T C G A G T C A G T C G T C A A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

Klf12/MA0742.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTGGACHGCGCCA-----
---GACCACGCCCTTATT
 A G T C A C G T A C T G A T C G G C T A A G T C G A C T A T C G A G T C A T C G A G T C A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTGGACHGCGCCA
GYCTGGYYTNTGTCA
 A C G T A C G T A G T C A C G T A C T G A T C G G C T A A G T C G A C T A T C G A G T C A T C G A G T C A G T C G T C A
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTGGACHGCGCCA--
---TTTGGCGCCAAA
 A G T C A C G T A C T G A T C G G C T A A G T C G A C T A T C G A G T C A T C G A G T C A G T C G T C A A C G T A C G T
A C G T A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A