Homer de novo Motif Results (hs_ProstateAdenocarcinoma_LNCaP_cancer_AR_SRX334264_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 699
Total background sequences = 45540
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C G A T C T A G A G C T C A G T A G C T C T G A G A T C G A C T G A C T G C T A 1e-159-3.672e+0253.36%11.49%24.9bp (34.5bp)FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer(0.966)
More Information | Similar Motifs Found		motif file (matrix)
2 C T A G C G T A G C T A A T G C C G T A C A G T C G A T T A G C G C A T C T A G C G A T G C A T G A T C G C A T A G C T G C T A 1e-93-2.148e+0221.32%2.32%19.4bp (33.5bp)GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer(0.953)
More Information | Similar Motifs Found		motif file (matrix)
3 G C T A C G A T A G C T A C G T A G C T C G T A C G A T C G A T C T A G T C A G 1e-21-5.053e+0113.73%4.37%26.6bp (29.6bp)HOXB13/MA0901.1/Jaspar(0.937)
More Information | Similar Motifs Found		motif file (matrix)
4 G T C A C T G A A C G T C T G A C G T A C G T A G A T C G T C A G C T A C A T G C G A T C G T A G A T C 1e-20-4.760e+018.44%1.86%24.5bp (31.2bp)FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer(0.685)
More Information | Similar Motifs Found		motif file (matrix)
5 A C T G C G T A A C G T G T C A C G T A A G C T C G T A A C G T A G T C C G A T A C G T A C G T C T G A 1e-15-3.531e+011.14%0.01%19.1bp (12.2bp)GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.826)
More Information | Similar Motifs Found		motif file (matrix)
6 A G T C A C G T A C T G A C T G G T A C C G T A A T C G T C G A A C T G A G T C 1e-13-3.124e+013.72%0.53%24.6bp (30.1bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.778)
More Information | Similar Motifs Found		motif file (matrix)
7 * T A C G A C G T C T A G A T C G C T G A C G A T A G T C C G A T A C G T A C T G A C T G A G T C G T A C 1e-9-2.224e+010.72%0.01%19.8bp (19.6bp)NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.738)
More Information | Similar Motifs Found		motif file (matrix)
8 * C G T A A C G T C G T A A C T G C G T A A C G T A G T C C G T A C T G A C G T A A G T C C G T A A C T G C G T A A C T G T G C A 1e-9-2.224e+010.72%0.01%14.6bp (0.0bp)PB0040.1_Lef1_1/Jaspar(0.652)
More Information | Similar Motifs Found		motif file (matrix)
9 * A C G T A C G T C G T A G T C A C A G T C G T A C G T A G T A C G T A C A C G T A C T G A G T C A C G T 1e-9-2.180e+011.00%0.02%28.9bp (49.7bp)SNAI2/MA0745.1/Jaspar(0.608)
More Information | Similar Motifs Found		motif file (matrix)
10 * C T A G G C A T A C G T C T G A C T A G A T G C A G T C C G T A A C T G A C T G C G A T C G T A G T C A 1e-9-2.099e+010.86%0.01%21.4bp (11.9bp)ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer(0.652)
More Information | Similar Motifs Found		motif file (matrix)
11 * A C G T C A T G A C T G A C G T A G T C A G T C A C G T C T A G A T G C G T A C A C G T A C T G A C T G 1e-8-2.023e+010.72%0.01%27.7bp (10.8bp)Hand1::Tcf3/MA0092.1/Jaspar(0.555)
More Information | Similar Motifs Found		motif file (matrix)
12 * T C A G T G C A C G T A A C T G A G T C A T C G G T A C G T A C A G T C A C G T A C T G A G T C A C G T A C T G C G A T C T A G 1e-8-2.023e+010.72%0.01%33.6bp (23.6bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.781)
More Information | Similar Motifs Found		motif file (matrix)
13 * A T G C G T C A C T A G C A T G C G T A A C G T G A T C G T A C C G T A C G T A A G C T C G T A A C T G C G T A C G T A A C T G 1e-8-2.023e+010.72%0.01%22.5bp (14.4bp)PH0057.1_Hoxb13/Jaspar(0.592)
More Information | Similar Motifs Found		motif file (matrix)
14 * A T G C A T C G C G T A C A G T A G T C A G T C C G A T A C T G C T G A A G T C A G C T A C G T A C T G 1e-8-1.990e+010.57%0.00%21.3bp (11.2bp)ZEB1/MA0103.2/Jaspar(0.600)
More Information | Similar Motifs Found		motif file (matrix)
15 * A C G T A C T G C G T A A G T C A T G C A C G T T A C G C G T A G A T C C G A T C T G A A C T G A C G T A G C T A G C T C G T A 1e-8-1.990e+010.57%0.00%22.2bp (0.0bp)RORA/MA0071.1/Jaspar(0.666)
More Information | Similar Motifs Found		motif file (matrix)
16 * A G C T A G C T C G T A G C T A A C G T C A T G A C T G A G T C C G A T C G A T T C G A C G T A G T A C 1e-8-1.975e+013.58%0.84%26.9bp (30.9bp)Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.711)
More Information | Similar Motifs Found		motif file (matrix)
17 * A G T C A C G T A G T C C G T A C T G A C T A G A G T C C G T A G C A T A G T C 1e-8-1.898e+011.57%0.14%22.4bp (29.6bp)ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer(0.732)
More Information | Similar Motifs Found		motif file (matrix)
18 * C G T A C T A G G T C A G A C T A C G T A G T C C G T A G T C A C G A T A C T G C A T G C T G A C A G T 1e-7-1.780e+011.00%0.04%27.5bp (28.0bp)PB0028.1_Hbp1_1/Jaspar(0.698)
More Information | Similar Motifs Found		motif file (matrix)
19 * C G A T A C T G A C T G T A C G T C G A C G A T A C T G G T A C G T C A C G T A C G T A C G A T G C A T 1e-7-1.737e+011.29%0.09%26.3bp (30.7bp)Pou2f3/MA0627.1/Jaspar(0.647)
More Information | Similar Motifs Found		motif file (matrix)
20 * A C G T C G T A C T G A A C G T A C T G A C G T C G A T C G T A A C G T A G T C C G T A A C T G A G T C 1e-7-1.714e+010.57%0.00%6.4bp (0.0bp)PB0022.1_Gata5_1/Jaspar(0.698)
More Information | Similar Motifs Found		motif file (matrix)
21 * C G T A C G T A A C G T C G T A C G A T G T C A A G T C C G T A A T C G A G T C A C G T A G T C A G T C G T C A C G T A A C T G 1e-7-1.714e+010.57%0.00%30.5bp (0.0bp)MF0005.1_Forkhead_class/Jaspar(0.526)
More Information | Similar Motifs Found		motif file (matrix)
22 * C A T G C G T A C G A T G T A C G C T A C T G A T A C G C A G T A C T G A G C T A C G T C T A G G C T A 1e-5-1.364e+012.58%0.65%22.3bp (29.3bp)NKX2-3/MA0672.1/Jaspar(0.657)
More Information | Similar Motifs Found		motif file (matrix)
23 * A C G T A G T C A G T C A G T C A C G T A G T C A G T C C G T A C G T A A G T C A C G T A C T G A G T C 1e-5-1.227e+010.43%0.01%32.4bp (18.8bp)PB0150.1_Mybl1_2/Jaspar(0.703)
More Information | Similar Motifs Found		motif file (matrix)