Information for 10-TGACCTVDHTAGTTTA (Motif 15)

A C G T A C T G C G T A A G T C A T G C A C G T T A C G C G T A G A T C C G A T C T G A A C T G A C G T A G C T A G C T C G T A
Reverse Opposite:
A C G T C T G A C T G A C G T A A G T C A G C T C G T A C A T G G A C T A G T C C G T A A T C G C T A G A C G T A G T C C G T A
p-value:1e-8
log p-value:-1.990e+01
Information Content per bp:1.769
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.5 +/- 22.2bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA/MA0071.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGACCTVDHTAGTTTA
TGACCTTGAT------
 A C G T A C T G C G T A A G T C A T G C A C G T T A C G C G T A G A T C C G A T C T G A A C T G A C G T A G C T A G C T C G T A
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGACCTVDHTAGTTTA
TGACCTYA--------
 A C G T A C T G C G T A A G T C A T G C A C G T T A C G C G T A G A T C C G A T C T G A A C T G A C G T A G C T A G C T C G T A
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGACCTVDHTAGTTTA
TGACCTARTT------
 A C G T A C T G C G T A A G T C A T G C A C G T T A C G C G T A G A T C C G A T C T G A A C T G A C G T A G C T A G C T C G T A
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGACCTVDHTAGTTTA
TGACCT----------
 A C G T A C T G C G T A A G T C A T G C A C G T T A C G C G T A G A T C C G A T C T G A A C T G A C G T A G C T A G C T C G T A
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTVDHTAGTTTA
GTGACCTT---------
 A C G T A C G T A C T G C G T A A G T C A T G C A C G T T A C G C G T A G A T C C G A T C T G A A C T G A C G T A G C T A G C T C G T A
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGACCTVDHTAGTTTA
TGACGT----------
 A C G T A C T G C G T A A G T C A T G C A C G T T A C G C G T A G A T C C G A T C T G A A C T G A C G T A G C T A G C T C G T A
A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGACCTVDHTAGTTTA
TGACCYCT--------
 A C G T A C T G C G T A A G T C A T G C A C G T T A C G C G T A G A T C C G A T C T G A A C T G A C G T A G C T A G C T C G T A
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTVDHTAGTTTA
TTGACCTANTTATN---
 A C G T A C G T A C T G C G T A A G T C A T G C A C G T T A C G C G T A G A T C C G A T C T G A A C T G A C G T A G C T A G C T C G T A
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGACCTVDHTAGTTTA
NTGACCTTGA-------
 A C G T A C G T A C T G C G T A A G T C A T G C A C G T T A C G C G T A G A T C C G A T C T G A A C T G A C G T A G C T A G C T C G T A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTVDHTAGTTTA
CNNTTGACCTTTG-------
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A T G C A C G T T A C G C G T A G A T C C G A T C T G A A C T G A C G T A G C T A G C T C G T A
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T