Information for 20-GATCAAGTGTTGA (Motif 22)

C A T G C G T A C G A T G T A C G C T A C T G A T A C G C A G T A C T G A G C T A C G T C T A G G C T A
Reverse Opposite:
C G A T G A T C G T C A T C G A A G T C G C T A A G T C A G C T C A G T C A T G C G T A C G A T G T A C
p-value:1e-5
log p-value:-1.364e+01
Information Content per bp:1.667
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif294.7
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets50.1 +/- 22.3bp
Average Position of motif in Background46.8 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GATCAAGTGTTGA
-NTCAAGTGGN--
 C A T G C G T A C G A T G T A C G C T A C T G A T A C G C A G T A C T G A G C T A C G T C T A G G C T A
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GATCAAGTGTTGA
-NTCAAGTGG---
 C A T G C G T A C G A T G T A C G C T A C T G A T A C G C A G T A C T G A G C T A C G T C T A G G C T A
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GATCAAGTGTTGA-
NNATNAATTGTTTNN
 A C G T C A T G C G T A C G A T G T A C G C T A C T G A T A C G C A G T A C T G A G C T A C G T C T A G G C T A A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GATCAAGTGTTGA
--TTRAGTGSYK-
 C A T G C G T A C G A T G T A C G C T A C T G A T A C G C A G T A C T G A G C T A C G T C T A G G C T A
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GATCAAGTGTTGA
--TTAAGTGGN--
 C A T G C G T A C G A T G T A C G C T A C T G A T A C G C A G T A C T G A G C T A C G T C T A G G C T A
A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GATCAAGTGTTGA
--TTAAGTGGT--
 C A T G C G T A C G A T G T A C G C T A C T G A T A C G C A G T A C T G A G C T A C G T C T A G G C T A
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

PH0016.1_Cux1_1/Jaspar

Match Rank:7
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GATCAAGTGTTGA
TNAGNTGATCAACCGGT--
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A C G A T G T A C G C T A C T G A T A C G C A G T A C T G A G C T A C G T C T A G G C T A
G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T A C G T A C G T

MYF6/MA0667.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GATCAAGTGTTGA
-AACAGCTGTT--
 C A T G C G T A C G A T G T A C G C T A C T G A T A C G C A G T A C T G A G C T A C G T C T A G G C T A
A C G T T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GATCAAGTGTTGA-
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T C A T G C G T A C G A T G T A C G C T A C T G A T A C G C A G T A C T G A G C T A C G T C T A G G C T A A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PB0042.1_Mafk_1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GATCAAGTGTTGA---
-TAAAAATGCTGACTT
 C A T G C G T A C G A T G T A C G C T A C T G A T A C G C A G T A C T G A G C T A C G T C T A G G C T A A C G T A C G T A C G T
A C G T C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T