Information for 13-TKGTYCTGSMTKG (Motif 11)

A C G T C A T G A C T G A C G T A G T C A G T C A C G T C T A G A T G C G T A C A C G T A C T G A C T G
Reverse Opposite:
A G T C G T A C C G T A A C T G A T C G A G T C C G T A A C T G C T A G C G T A A G T C G T A C C G T A
p-value:1e-8
log p-value:-2.023e+01
Information Content per bp:1.855
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.2 +/- 27.7bp
Average Position of motif in Background18.1 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TKGTYCTGSMTKG
--GGTCTGGCAT-
 A C G T C A T G A C T G A C G T A G T C A G T C A C G T C T A G A T G C G T A C A C G T A C T G A C T G
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TKGTYCTGSMTKG
CCATTGTTTT------
 A C G T A C G T A C G T A C G T C A T G A C T G A C G T A G T C A G T C A C G T C T A G A T G C G T A C A C G T A C T G A C T G
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TKGTYCTGSMTKG-----
-NNTNNTGTCTGGNNTNG
 A C G T C A T G A C T G A C G T A G T C A G T C A C G T C T A G A T G C G T A C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TKGTYCTGSMTKG
CCATTGTTNY------
 A C G T A C G T A C G T A C G T C A T G A C T G A C G T A G T C A G T C A C G T C T A G A T G C G T A C A C G T A C T G A C T G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TKGTYCTGSMTKG
YCTTTGTTCC------
 A C G T A C G T A C G T A C G T C A T G A C T G A C G T A G T C A G T C A C G T C T A G A T G C G T A C A C G T A C T G A C T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TKGTYCTGSMTKG----
-NGTCACGCTTGGCTGC
 A C G T C A T G A C T G A C G T A G T C A G T C A C G T C T A G A T G C G T A C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------TKGTYCTGSMTKG
AANTTATTGTTCTNNA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G A C G T A G T C A G T C A C G T C T A G A T G C G T A C A C G T A C T G A C T G
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TKGTYCTGSMTKG
TAATTGTTCTAAAC--
 A C G T A C G T A C G T A C G T C A T G A C T G A C G T A G T C A G T C A C G T C T A G A T G C G T A C A C G T A C T G A C T G
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TKGTYCTGSMTKG
NCCATTGTTC-------
 A C G T A C G T A C G T A C G T A C G T C A T G A C T G A C G T A G T C A G T C A C G T C T A G A T G C G T A C A C G T A C T G A C T G
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TKGTYCTGSMTKG
BCNGGTTCTAGANCN
 A C G T A C G T A C G T C A T G A C T G A C G T A G T C A G T C A C G T C T A G A T G C G T A C A C G T A C T G A C T G
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T