p-value: | 1e-8 |
log p-value: | -2.023e+01 |
Information Content per bp: | 1.873 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.72% |
Number of Background Sequences with motif | 3.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 51.2 +/- 33.6bp |
Average Position of motif in Background | 70.8 +/- 23.6bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.78 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GAAGCGCCCTGCTGTG ----CCCCCTGCTGTG |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 2 |
Score: | 0.77 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GAAGCGCCCTGCTGTG- --GGCCYCCTGCTGDGH |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 3 |
Score: | 0.70 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GAAGCGCCCTGCTGTG--- ----TNTCCTGCTGTGNNG |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 4 |
Score: | 0.69 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GAAGCGCCCTGCTGTG--- ----NNTCCTGCTGTGNNN |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 5 |
Score: | 0.69 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | GAAGCGCCCTGCTGTG- -------CCTGCTGAGH |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 6 |
Score: | 0.68 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GAAGCGCCCTGCTGTG--- ----TCNCCTGCTGNGNNN |
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ZIC1/MA0696.1/Jaspar
Match Rank: | 7 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GAAGCGCCCTGCTGTG --GACCCCCCGCTGTG |
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ZIC3/MA0697.1/Jaspar
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GAAGCGCCCTGCTGTG- --GACCCCCCGCTGCGC |
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ZIC4/MA0751.1/Jaspar
Match Rank: | 9 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GAAGCGCCCTGCTGTG- --GACCCCCCGCTGTGC |
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BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GAAGCGCCCTGCTGTG CNNBRGCGCCCCCTGSTGGC |
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