Information for 15-CGADCCTGACTTG (Motif 14)

A T G C A T C G C G T A C A G T A G T C A G T C C G A T A C T G C T G A A G T C A G C T A C G T A C T G
Reverse Opposite:
G T A C C G T A C T G A A C T G A G C T A G T C C G T A C T A G A C T G G A C T A C G T A T G C A T C G
p-value:1e-8
log p-value:-1.990e+01
Information Content per bp:1.810
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.2 +/- 21.3bp
Average Position of motif in Background24.7 +/- 11.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CGADCCTGACTTG
----CCTCACCTG
 A T G C A T C G C G T A C A G T A G T C A G T C C G A T A C T G C T G A A G T C A G C T A C G T A C T G
A C G T A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGADCCTGACTTG--
SCAGYCADGCATGAC
 A T G C A T C G C G T A C A G T A G T C A G T C C G A T A C T G C T G A A G T C A G C T A C G T A C T G A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGADCCTGACTTG---
CAAATCCAGACATCACA
 A C G T A T G C A T C G C G T A C A G T A G T C A G T C C G A T A C T G C T G A A G T C A G C T A C G T A C T G A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ESR2/MA0258.2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CGADCCTGACTTG
AGGNCANNGTGACCT-
 A C G T A C G T A C G T A T G C A T C G C G T A C A G T A G T C A G T C C G A T A C T G C T G A A G T C A G C T A C G T A C T G
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CGADCCTGACTTG
GGGGCCGAGGCCTG
 A C G T A T G C A T C G C G T A C A G T A G T C A G T C C G A T A C T G C T G A A G T C A G C T A C G T A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CGADCCTGACTTG-
------TGACCTYA
 A T G C A T C G C G T A C A G T A G T C A G T C C G A T A C T G C T G A A G T C A G C T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGADCCTGACTTG
-ATGCCAGACN--
 A T G C A T C G C G T A C A G T A G T C A G T C C G A T A C T G C T G A A G T C A G C T A C G T A C T G
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGADCCTGACTTG
TGACCTTGACCT-
 A T G C A T C G C G T A C A G T A G T C A G T C C G A T A C T G C T G A A G T C A G C T A C G T A C T G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CGADCCTGACTTG-
-----TTGACTTTT
 A T G C A T C G C G T A C A G T A G T C A G T C C G A T A C T G C T G A A G T C A G C T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CGADCCTGACTTG
------TGACCT-
 A T G C A T C G C G T A C A G T A G T C A G T C C G A T A C T G C T G A A G T C A G C T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T