Information for 11-CTCAAGCATC (Motif 17)

A G T C A C G T A G T C C G T A C T G A C T A G A G T C C G T A G C A T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C T G A G T C A G C T A C G T A C T G C G T A A C T G
p-value:1e-8
log p-value:-1.898e+01
Information Content per bp:1.900
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif62.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets40.5 +/- 22.4bp
Average Position of motif in Background46.6 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CTCAAGCATC
GGCTCYAKCAYC
 A C G T A C G T A G T C A C G T A G T C C G T A C T G A C T A G A G T C C G T A G C A T A G T C
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CTCAAGCATC
AGCCACTCAAG----
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A C T G A C T A G A G T C C G T A G C A T A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTCAAGCATC
TBGCACGCAA-
 A C G T A G T C A C G T A G T C C G T A C T G A C T A G A G T C C G T A G C A T A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTCAAGCATC
CGCCTCAGGCA--
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A C T G A C T A G A G T C C G T A G C A T A G T C
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTCAAGCATC----
CGACCCAATCAACGGTG
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A C T G A C T A G A G T C C G T A G C A T A G T C A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTCAAGCATC
AGCCTCAGGCA--
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A C T G A C T A G A G T C C G T A G C A T A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTCAAGCATC
AGCCTCAGGCA--
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A C T G A C T A G A G T C C G T A G C A T A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTCAAGCATC
--CACGCA--
 A G T C A C G T A G T C C G T A C T G A C T A G A G T C C G T A G C A T A G T C
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTCAAGCATC
-CCAATCAA-
 A G T C A C G T A G T C C G T A C T G A C T A G A G T C C G T A G C A T A G T C
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCAAGCATC
CCATCAATCAAA
 A C G T A C G T A G T C A C G T A G T C C G T A C T G A C T A G A G T C C G T A G C A T A G T C
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A