Homer de novo Motif Results (hs_MammaryGland_MCF7_Cancer_ERA_SRX1469949_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 742
Total background sequences = 46697
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C G T A C C T G A C A T G C T A G C A G T A T G C C T G A T A G C A T C G A T C G G C A T A T C G G T C A G A T C G T A C 1e-88-2.043e+0217.79%1.70%20.7bp (32.6bp)ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer(0.979)
More Information | Similar Motifs Found
motif file (matrix)
2 A G C T A C G T C T A G A C G T C A G T A C G T C T A G G A T C G C A T G A C T 1e-35-8.124e+0115.09%3.69%27.2bp (31.9bp)MF0005.1_Forkhead_class/Jaspar(0.883)
More Information | Similar Motifs Found
motif file (matrix)
3 T G A C G C T A C T G A C G T A C A G T C A G T C G T A G T A C G T C A C G T A C A T G C T A G C G A T T G A C C G T A A G C T 1e-24-5.636e+0115.63%5.28%24.3bp (30.6bp)Esrrg/MA0643.1/Jaspar(0.771)
More Information | Similar Motifs Found
motif file (matrix)
4 C G T A A G C T G A C T C G T A A C T G C G T A A C G T A T C G C G T A G T A C G T C A A G C T A G C T 1e-24-5.554e+011.48%0.01%23.1bp (16.9bp)Atf3/MA0605.1/Jaspar(0.702)
More Information | Similar Motifs Found
motif file (matrix)
5 C A G T A C T G T A G C A G T C A G T C G A C T T A C G C T G A C T A G A T C G A T G C G C T A A C G T 1e-20-4.631e+017.28%1.50%23.7bp (30.2bp)AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer(0.916)
More Information | Similar Motifs Found
motif file (matrix)
6 C A G T G A C T C A T G C A T G A G C T T C A G T G C A A C G T A C T G C G T A A T G C A C G T A G T C C G T A A C G T G A T C 1e-18-4.363e+015.26%0.80%23.4bp (33.2bp)Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer(0.979)
More Information | Similar Motifs Found
motif file (matrix)
7 T A C G A T G C C A T G A G T C G T C A A T G C T G A C A G T C T G A C A C T G A T C G C T A G T A C G G C A T A T C G C T A G 1e-15-3.610e+013.91%0.52%23.4bp (29.2bp)PB0101.1_Zic1_1/Jaspar(0.655)
More Information | Similar Motifs Found
motif file (matrix)
8 C G A T G C A T C T A G C T G A A G T C G C T A C G T A C G T A C G A T G T C A A G C T G A C T G T C A C A T G A G T C G A C T 1e-15-3.502e+011.75%0.06%21.1bp (25.4bp)Arid5a/MA0602.1/Jaspar(0.615)
More Information | Similar Motifs Found
motif file (matrix)
9 G T A C C G T A T A G C A T G C A G T C G A T C A T C G G T C A T A G C T G C A A C T G T A C G C T G A A G T C G T A C T A C G 1e-14-3.277e+012.56%0.21%25.4bp (28.2bp)Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer(0.599)
More Information | Similar Motifs Found
motif file (matrix)
10 C G T A A G T C G T A C C G A T A G C T A G T C G A C T A C G T G A T C A T G C G T A C A G C T A T G C C G T A C A T G C T A G 1e-14-3.271e+011.21%0.02%25.0bp (27.7bp)AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer(0.682)
More Information | Similar Motifs Found
motif file (matrix)
11 A C T G C T G A A C T G C T A G A C G T G A C T C G T A C G T A A C T G C T G A A C G T A T C G G T C A 1e-13-3.146e+010.81%0.00%22.5bp (17.3bp)RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer(0.687)
More Information | Similar Motifs Found
motif file (matrix)
12 A C T G G T C A C G A T A T G C A C G T C G T A C G T A A C G T A G T C C G T A G T C A C T A G C G A T 1e-13-3.146e+010.81%0.00%27.2bp (24.1bp)DUXA/MA0884.1/Jaspar(0.787)
More Information | Similar Motifs Found
motif file (matrix)
13 C G A T A T C G C G T A A C G T A G T C C G A T A C T G A C G T A C T G C A T G A C T G A C T G A G T C C G T A A C T G A T C G 1e-13-3.146e+010.81%0.00%13.9bp (0.0bp)Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer(0.614)
More Information | Similar Motifs Found
motif file (matrix)
14 A T G C C G A T A G C T A T G C C G T A A G C T C T G A G T A C G T A C A G T C G A C T G T C A C A T G A G T C G A C T A G T C 1e-12-2.945e+011.48%0.05%20.7bp (26.5bp)PH0161.1_Six1/Jaspar(0.613)
More Information | Similar Motifs Found
motif file (matrix)
15 A G C T G A T C G C A T A T G C G A T C A G T C A G C T A C G T C A T G T C G A A T G C T G A C C G A T A C T G C T G A C T G A 1e-12-2.921e+013.37%0.50%24.1bp (29.9bp)RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer(0.599)
More Information | Similar Motifs Found
motif file (matrix)
16 C T A G A C T G A G C T A G T C C T A G C T A G T A C G A G C T A T G C T C G A 1e-12-2.860e+016.47%1.88%29.6bp (33.2bp)PB0153.1_Nr2f2_2/Jaspar(0.797)
More Information | Similar Motifs Found
motif file (matrix)
17 * G T C A A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G C T G A A G C T G T C A C G T A 1e-11-2.732e+010.81%0.01%21.3bp (0.0bp)NRL/MA0842.1/Jaspar(0.763)
More Information | Similar Motifs Found
motif file (matrix)
18 * A T C G G T C A C G T A A G T C A G T C A G C T G A C T A C G T A G T C C G T A A G T C G T A C A G T C A G T C A C G T T G A C 1e-11-2.732e+010.81%0.01%27.7bp (0.5bp)TBR1/MA0802.1/Jaspar(0.724)
More Information | Similar Motifs Found
motif file (matrix)
19 * C G T A A C G T A C T G C G T A G T A C G T A C C G T A G T A C C T G A A C G T C G A T A G C T A G C T A C T G G T A C A G T C 1e-11-2.732e+010.81%0.01%24.0bp (20.0bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.581)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C T G G T A C C G T A A C T G C G T A A C G T C G T A C G T A A C T G A T G C 1e-11-2.626e+012.16%0.20%27.4bp (28.3bp)Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer(0.848)
More Information | Similar Motifs Found
motif file (matrix)
21 * C G T A A C T G C G T A C G T A A G C T A C G T A C G T A C T G A C G T A G T C C G T A C G A T C G T A 1e-11-2.552e+010.67%0.00%9.1bp (0.0bp)PH0105.1_Meis3/Jaspar(0.678)
More Information | Similar Motifs Found
motif file (matrix)
22 * A G T C A C G T A G T C C G T A A C T G A G T C G T A C A C G T C T A G C G T A C T A G A C T G C G T A 1e-11-2.552e+010.67%0.00%25.8bp (0.0bp)Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer(0.653)
More Information | Similar Motifs Found
motif file (matrix)
23 * C G T A C G T A C T A G C T G A A C G T C T A G C G T A C G T A A C G T C T A G C G T A C G T A A C G T C T G A A G C T A C G T 1e-11-2.552e+010.67%0.00%23.6bp (11.9bp)PB0028.1_Hbp1_1/Jaspar(0.657)
More Information | Similar Motifs Found
motif file (matrix)
24 * A G T C C G T A A T G C A T G C G T C A C G A T A C G T A G T C A G T C A G C T C T A G A C T G T G A C C T G A C T A G A T C G 1e-11-2.552e+010.67%0.00%23.7bp (15.4bp)Bcl6/MA0463.1/Jaspar(0.628)
More Information | Similar Motifs Found
motif file (matrix)
25 * A C T G A G T C C G T A C T G A C G T A C T G A G T A C A G T C G T A C A C G T A C T G G T C A A G T C 1e-10-2.490e+010.81%0.01%25.5bp (18.1bp)Pax2/MA0067.1/Jaspar(0.575)
More Information | Similar Motifs Found
motif file (matrix)
26 * G T C A A C T G C A T G C G T A A C T G A G T C G T A C A G T C T A G C G T C A C G T A A T C G C G T A A T C G G C A T T C G A 1e-10-2.490e+010.81%0.01%22.8bp (21.0bp)POL013.1_MED-1/Jaspar(0.560)
More Information | Similar Motifs Found
motif file (matrix)
27 * G T C A A C G T A C G T A C G T T A G C G C T A A G C T G A T C A G C T G T A C A T G C C G T A G T A C A G T C A C G T A C T G 1e-10-2.397e+012.29%0.27%25.0bp (27.3bp)E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer(0.636)
More Information | Similar Motifs Found
motif file (matrix)
28 * C G A T T A G C C T G A A C T G G A T C G A C T G T C A C G T A A C T G A G T C A G C T A C G T T G A C A G C T T G C A C G A T 1e-10-2.306e+012.43%0.32%23.5bp (29.9bp)POL008.1_DCE_S_I/Jaspar(0.642)
More Information | Similar Motifs Found
motif file (matrix)
29 * G A C T A G T C A C G T A T C G C G T A T A G C T C G A A C G T C T A G G T C A A G T C C G T A A G T C 1e-9-2.286e+011.08%0.03%28.0bp (30.5bp)PH0164.1_Six4/Jaspar(0.672)
More Information | Similar Motifs Found
motif file (matrix)
30 * A T G C A G T C C G A T C T A G T C G A G A C T A G C T C G A T C T G A C G T A C G T A G T C A C G T A G T A C G T C A T A C G 1e-9-2.182e+011.08%0.03%26.7bp (16.0bp)CHR(?)/Hela-CellCycle-Expression/Homer(0.622)
More Information | Similar Motifs Found
motif file (matrix)
31 * T A G C A C G T A C T G A C T G A C G T A C T G C G T A C A T G A C G T C T A G A G T C C G T A T A C G C G T A C T A G C G A T 1e-9-2.180e+011.35%0.07%20.4bp (31.4bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.571)
More Information | Similar Motifs Found
motif file (matrix)
32 * A G T C C G T A A T G C A G T C A G T C C G A T A C T G T G C A C T A G A C T G A T G C G A T C T G A C 1e-8-2.028e+011.89%0.21%25.7bp (31.6bp)AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer(0.672)
More Information | Similar Motifs Found
motif file (matrix)
33 * A C G T T A G C C G T A C G T A G T A C T C G A T C A G A C T G G A T C A G T C G A T C A G T C G C T A 1e-8-2.009e+011.08%0.04%25.6bp (21.5bp)FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer(0.637)
More Information | Similar Motifs Found
motif file (matrix)
34 * C G T A C G A T A C G T C G T A A C G T A C T G C G T A A C T G A G T C A G C T A C T G A C T G A C G T 1e-8-1.977e+010.54%0.00%5.6bp (0.0bp)PH0152.1_Pou6f1_2/Jaspar(0.675)
More Information | Similar Motifs Found
motif file (matrix)
35 * C G T A A C G T A C T G A C G T A C T G A C G T A G T C A G T C C T G A A C T G C G T A A G T C A C T G 1e-8-1.977e+010.54%0.00%14.4bp (8.8bp)SMAD3/MA0795.1/Jaspar(0.688)
More Information | Similar Motifs Found
motif file (matrix)
36 * C G T A C A G T G T C A C T G A C T A G T G A C G T C A C G T A C A T G A T G C A C G T C T A G T C A G C G T A T A C G A G C T 1e-7-1.779e+011.08%0.06%27.5bp (26.5bp)Myog/MA0500.1/Jaspar(0.561)
More Information | Similar Motifs Found
motif file (matrix)
37 * C G T A A C G T A C T G A G T C C G T A C G T A A C G T A C T G A C G T A G T C 1e-7-1.701e+010.54%0.01%24.8bp (15.9bp)Ddit3::Cebpa/MA0019.1/Jaspar(0.765)
More Information | Similar Motifs Found
motif file (matrix)
38 * A G C T A G T C A C G T A C T G A G T C C G T A A C T G A C G T A G T C A C G T A G T C C G A T A C T G A C T G A T C G G A C T 1e-7-1.701e+010.54%0.00%27.7bp (0.0bp)ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer(0.550)
More Information | Similar Motifs Found
motif file (matrix)
39 * A C G T G A T C G C A T A C G T C T A G A C T G A G T C A G T C G A C T C G A T 1e-7-1.657e+012.96%0.73%23.2bp (30.2bp)SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer(0.760)
More Information | Similar Motifs Found
motif file (matrix)
40 * C T G A A T C G C G A T A G T C G T A C A G T C C G T A A C T G G C T A A C G T A G T C A G T C G A T C G T C A C T G A C T A G 1e-6-1.540e+010.54%0.01%27.6bp (8.3bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.504)
More Information | Similar Motifs Found
motif file (matrix)
41 * A G T C C G T A A C T G A T C G A C G T A T G C C G T A A G T C G T A C G C T A A C T G A C T G C G A T A C G T A T G C A C G T 1e-6-1.540e+010.54%0.01%11.3bp (9.1bp)SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer(0.600)
More Information | Similar Motifs Found
motif file (matrix)
42 * A C T G A G T C C G T A A G T C A C T G A C T G G T A C A C G T A T G C A C G T 1e-6-1.464e+010.67%0.02%28.4bp (16.9bp)HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer(0.645)
More Information | Similar Motifs Found
motif file (matrix)
43 * A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C G T C G T A A T G C 1e-6-1.426e+010.54%0.01%4.9bp (12.9bp)Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer(0.656)
More Information | Similar Motifs Found
motif file (matrix)
44 * C G T A A C G T C G T A A G T C A C G T A C T G A C G T A G T C A G T C C G T A 1e-6-1.423e+010.40%0.00%32.1bp (15.8bp)NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer(0.656)
More Information | Similar Motifs Found
motif file (matrix)
45 * C G T A A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C T G A C G T A C G T A C T G C G T A 1e-6-1.423e+010.40%0.00%13.5bp (0.0bp)Myb/MA0100.2/Jaspar(0.568)
More Information | Similar Motifs Found
motif file (matrix)
46 * T A C G A G T C A G T C A G C T A C T G A C G T G T A C A G T C A C T G G T C A A G T C A G T C C T A G A C T G C T G A A G T C 1e-6-1.423e+010.40%0.00%20.2bp (17.8bp)GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer(0.575)
More Information | Similar Motifs Found
motif file (matrix)