Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-66 | -1.524e+02 | 0.0000 | 104.0 | 14.02% | 674.9 | 1.45% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-38 | -8.894e+01 | 0.0000 | 139.0 | 18.73% | 2412.6 | 5.17% | motif file (matrix) |
svg |
3 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-37 | -8.595e+01 | 0.0000 | 346.0 | 46.63% | 11564.6 | 24.78% | motif file (matrix) |
svg |
4 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-36 | -8.507e+01 | 0.0000 | 117.0 | 15.77% | 1800.7 | 3.86% | motif file (matrix) |
svg |
5 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-34 | -7.926e+01 | 0.0000 | 197.0 | 26.55% | 4857.6 | 10.41% | motif file (matrix) |
svg |
6 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-33 | -7.777e+01 | 0.0000 | 118.0 | 15.90% | 1982.5 | 4.25% | motif file (matrix) |
svg |
7 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-25 | -5.886e+01 | 0.0000 | 97.0 | 13.07% | 1736.5 | 3.72% | motif file (matrix) |
svg |
8 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-19 | -4.554e+01 | 0.0000 | 81.0 | 10.92% | 1537.3 | 3.29% | motif file (matrix) |
svg |
9 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-19 | -4.515e+01 | 0.0000 | 47.0 | 6.33% | 540.5 | 1.16% | motif file (matrix) |
svg |
10 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-18 | -4.343e+01 | 0.0000 | 79.0 | 10.65% | 1525.5 | 3.27% | motif file (matrix) |
svg |
11 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-17 | -4.140e+01 | 0.0000 | 93.0 | 12.53% | 2086.4 | 4.47% | motif file (matrix) |
svg |
12 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-17 | -4.098e+01 | 0.0000 | 43.0 | 5.80% | 500.4 | 1.07% | motif file (matrix) |
svg |
13 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-17 | -3.972e+01 | 0.0000 | 69.0 | 9.30% | 1286.2 | 2.76% | motif file (matrix) |
svg |
14 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-17 | -3.963e+01 | 0.0000 | 174.0 | 23.45% | 5633.7 | 12.07% | motif file (matrix) |
svg |
15 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-16 | -3.810e+01 | 0.0000 | 50.0 | 6.74% | 733.5 | 1.57% | motif file (matrix) |
svg |
16 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-16 | -3.804e+01 | 0.0000 | 74.0 | 9.97% | 1502.3 | 3.22% | motif file (matrix) |
svg |
17 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-16 | -3.745e+01 | 0.0000 | 106.0 | 14.29% | 2739.1 | 5.87% | motif file (matrix) |
svg |
18 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-16 | -3.720e+01 | 0.0000 | 89.0 | 11.99% | 2078.4 | 4.45% | motif file (matrix) |
svg |
19 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-16 | -3.715e+01 | 0.0000 | 50.0 | 6.74% | 751.6 | 1.61% | motif file (matrix) |
svg |
20 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-15 | -3.684e+01 | 0.0000 | 73.0 | 9.84% | 1502.1 | 3.22% | motif file (matrix) |
svg |
21 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-15 | -3.682e+01 | 0.0000 | 81.0 | 10.92% | 1791.4 | 3.84% | motif file (matrix) |
svg |
22 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-15 | -3.623e+01 | 0.0000 | 66.0 | 8.89% | 1277.2 | 2.74% | motif file (matrix) |
svg |
23 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-15 | -3.586e+01 | 0.0000 | 73.0 | 9.84% | 1531.8 | 3.28% | motif file (matrix) |
svg |
24 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-15 | -3.494e+01 | 0.0000 | 89.0 | 11.99% | 2160.1 | 4.63% | motif file (matrix) |
svg |
25 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-14 | -3.304e+01 | 0.0000 | 72.0 | 9.70% | 1583.9 | 3.39% | motif file (matrix) |
svg |
26 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-13 | -3.172e+01 | 0.0000 | 58.0 | 7.82% | 1128.2 | 2.42% | motif file (matrix) |
svg |
27 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-13 | -3.096e+01 | 0.0000 | 62.0 | 8.36% | 1288.8 | 2.76% | motif file (matrix) |
svg |
28 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-12 | -2.794e+01 | 0.0000 | 132.0 | 17.79% | 4363.7 | 9.35% | motif file (matrix) |
svg |
29 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-11 | -2.603e+01 | 0.0000 | 32.0 | 4.31% | 448.3 | 0.96% | motif file (matrix) |
svg |
30 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-10 | -2.470e+01 | 0.0000 | 25.0 | 3.37% | 287.7 | 0.62% | motif file (matrix) |
svg |
31 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-10 | -2.409e+01 | 0.0000 | 246.0 | 33.15% | 10556.3 | 22.62% | motif file (matrix) |
svg |
32 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-10 | -2.345e+01 | 0.0000 | 54.0 | 7.28% | 1239.3 | 2.66% | motif file (matrix) |
svg |
33 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-9 | -2.114e+01 | 0.0000 | 99.0 | 13.34% | 3254.1 | 6.97% | motif file (matrix) |
svg |
34 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-8 | -2.054e+01 | 0.0000 | 61.0 | 8.22% | 1626.5 | 3.48% | motif file (matrix) |
svg |
35 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-8 | -2.020e+01 | 0.0000 | 54.0 | 7.28% | 1361.0 | 2.92% | motif file (matrix) |
svg |
36 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-8 | -1.957e+01 | 0.0000 | 73.0 | 9.84% | 2178.4 | 4.67% | motif file (matrix) |
svg |
37 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-8 | -1.871e+01 | 0.0000 | 66.0 | 8.89% | 1921.8 | 4.12% | motif file (matrix) |
svg |
38 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-7 | -1.751e+01 | 0.0000 | 14.0 | 1.89% | 125.0 | 0.27% | motif file (matrix) |
svg |
39 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-7 | -1.749e+01 | 0.0000 | 16.0 | 2.16% | 169.8 | 0.36% | motif file (matrix) |
svg |
40 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-6 | -1.523e+01 | 0.0000 | 21.0 | 2.83% | 341.0 | 0.73% | motif file (matrix) |
svg |
41 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-5 | -1.381e+01 | 0.0000 | 21.0 | 2.83% | 372.8 | 0.80% | motif file (matrix) |
svg |
42 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.326e+01 | 0.0000 | 11.0 | 1.48% | 107.6 | 0.23% | motif file (matrix) |
svg |
43 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.311e+01 | 0.0000 | 32.0 | 4.31% | 783.1 | 1.68% | motif file (matrix) |
svg |
44 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-5 | -1.232e+01 | 0.0000 | 9.0 | 1.21% | 75.7 | 0.16% | motif file (matrix) |
svg |
45 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-5 | -1.193e+01 | 0.0001 | 29.0 | 3.91% | 713.3 | 1.53% | motif file (matrix) |
svg |
46 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-4 | -1.132e+01 | 0.0001 | 39.0 | 5.26% | 1148.5 | 2.46% | motif file (matrix) |
svg |
47 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-4 | -1.124e+01 | 0.0001 | 9.0 | 1.21% | 86.2 | 0.18% | motif file (matrix) |
svg |
48 |
| GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -1.124e+01 | 0.0001 | 11.0 | 1.48% | 133.7 | 0.29% | motif file (matrix) |
svg |
49 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-4 | -1.094e+01 | 0.0001 | 16.0 | 2.16% | 282.0 | 0.60% | motif file (matrix) |
svg |
50 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-4 | -1.064e+01 | 0.0002 | 203.0 | 27.36% | 9811.8 | 21.02% | motif file (matrix) |
svg |
51 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-4 | -1.044e+01 | 0.0002 | 15.0 | 2.02% | 262.2 | 0.56% | motif file (matrix) |
svg |
52 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-4 | -1.005e+01 | 0.0003 | 20.0 | 2.70% | 443.9 | 0.95% | motif file (matrix) |
svg |
53 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-4 | -9.911e+00 | 0.0003 | 47.0 | 6.33% | 1588.7 | 3.40% | motif file (matrix) |
svg |
54 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-4 | -9.680e+00 | 0.0004 | 27.0 | 3.64% | 727.4 | 1.56% | motif file (matrix) |
svg |
55 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-4 | -9.460e+00 | 0.0005 | 6.0 | 0.81% | 43.9 | 0.09% | motif file (matrix) |
svg |
56 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -9.076e+00 | 0.0007 | 79.0 | 10.65% | 3229.3 | 6.92% | motif file (matrix) |
svg |
57 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-3 | -8.677e+00 | 0.0011 | 7.0 | 0.94% | 71.3 | 0.15% | motif file (matrix) |
svg |
58 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-3 | -8.307e+00 | 0.0015 | 31.0 | 4.18% | 966.1 | 2.07% | motif file (matrix) |
svg |
59 |
| EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer | 1e-3 | -8.254e+00 | 0.0016 | 18.0 | 2.43% | 431.2 | 0.92% | motif file (matrix) |
svg |
60 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-3 | -8.219e+00 | 0.0016 | 33.0 | 4.45% | 1060.2 | 2.27% | motif file (matrix) |
svg |
61 |
| GFY(?)/Promoter/Homer | 1e-3 | -7.936e+00 | 0.0021 | 8.0 | 1.08% | 106.2 | 0.23% | motif file (matrix) |
svg |
62 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.751e+00 | 0.0025 | 63.0 | 8.49% | 2547.0 | 5.46% | motif file (matrix) |
svg |
63 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -7.472e+00 | 0.0033 | 28.0 | 3.77% | 882.1 | 1.89% | motif file (matrix) |
svg |
64 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-3 | -7.401e+00 | 0.0035 | 43.0 | 5.80% | 1584.1 | 3.39% | motif file (matrix) |
svg |
65 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-3 | -7.348e+00 | 0.0036 | 21.0 | 2.83% | 588.5 | 1.26% | motif file (matrix) |
svg |
66 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-3 | -7.285e+00 | 0.0038 | 63.0 | 8.49% | 2594.7 | 5.56% | motif file (matrix) |
svg |
67 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.253e+00 | 0.0038 | 35.0 | 4.72% | 1215.9 | 2.61% | motif file (matrix) |
svg |
68 |
| GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.173e+00 | 0.0041 | 9.0 | 1.21% | 149.5 | 0.32% | motif file (matrix) |
svg |
69 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-3 | -6.967e+00 | 0.0050 | 56.0 | 7.55% | 2270.0 | 4.86% | motif file (matrix) |
svg |
70 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -6.863e+00 | 0.0054 | 18.0 | 2.43% | 487.7 | 1.04% | motif file (matrix) |
svg |
71 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -6.192e+00 | 0.0105 | 31.0 | 4.18% | 1104.4 | 2.37% | motif file (matrix) |
svg |
72 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -6.185e+00 | 0.0105 | 38.0 | 5.12% | 1442.9 | 3.09% | motif file (matrix) |
svg |
73 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.754e+00 | 0.0158 | 62.0 | 8.36% | 2717.4 | 5.82% | motif file (matrix) |
svg |
74 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.554e+00 | 0.0190 | 40.0 | 5.39% | 1599.4 | 3.43% | motif file (matrix) |
svg |
75 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-2 | -5.356e+00 | 0.0229 | 5.0 | 0.67% | 67.8 | 0.15% | motif file (matrix) |
svg |
76 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-2 | -5.183e+00 | 0.0269 | 12.0 | 1.62% | 317.1 | 0.68% | motif file (matrix) |
svg |
77 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -5.102e+00 | 0.0288 | 35.0 | 4.72% | 1391.2 | 2.98% | motif file (matrix) |
svg |
78 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -4.777e+00 | 0.0393 | 71.0 | 9.57% | 3339.2 | 7.15% | motif file (matrix) |
svg |
79 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-2 | -4.742e+00 | 0.0402 | 19.0 | 2.56% | 645.2 | 1.38% | motif file (matrix) |
svg |