Information for 19-CCTGRTTTRAAAWCAG (Motif 30)

A T G C A G T C C G A T C T A G T C G A G A C T A G C T C G A T C T G A C G T A C G T A G T C A C G T A G T A C G T C A T A C G
Reverse Opposite:
A T G C C A G T A C T G G C A T A C G T A C G T C G A T G A C T C G T A C T G A C G T A A G C T G A T C C G T A T A C G T A C G
p-value:1e-9
log p-value:-2.182e+01
Information Content per bp:1.692
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif16.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.1 +/- 26.7bp
Average Position of motif in Background50.5 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CCTGRTTTRAAAWCAG
-----TTTGAAACCG-
 A T G C A G T C C G A T C T A G T C G A G A C T A G C T C G A T C T G A C G T A C G T A G T C A C G T A G T A C G T C A T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCTGRTTTRAAAWCAG
---NATTCAAAT----
 A T G C A G T C C G A T C T A G T C G A G A C T A G C T C G A T C T G A C G T A C G T A G T C A C G T A G T A C G T C A T A C G
A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCTGRTTTRAAAWCAG----
---AAGGCGAAATCATCGCA
 A T G C A G T C C G A T C T A G T C G A G A C T A G C T C G A T C T G A C G T A C G T A G T C A C G T A G T A C G T C A T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Foxo1/MA0480.1/Jaspar

Match Rank:4
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CCTGRTTTRAAAWCAG--
-------TGTAAACAGGA
 A T G C A G T C C G A T C T A G T C G A G A C T A G C T C G A T C T G A C G T A C G T A G T C A C G T A G T A C G T C A T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CCTGRTTTRAAAWCAG-
-----WWTRTAAACAVG
 A T G C A G T C C G A T C T A G T C G A G A C T A G C T C G A T C T G A C G T A C G T A G T C A C G T A G T A C G T C A T A C G A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCTGRTTTRAAAWCAG
----WWATRTAAACAN
 A T G C A G T C C G A T C T A G T C G A G A C T A G C T C G A T C T G A C G T A C G T A G T C A C G T A G T A C G T C A T A C G
A C G T A C G T A C G T A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.54
Offset:8
Orientation:forward strand
Alignment:CCTGRTTTRAAAWCAG--
--------CAAATCACTG
 A T G C A G T C C G A T C T A G T C G A G A C T A G C T C G A T C T G A C G T A C G T A G T C A C G T A G T A C G T C A T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PB0187.1_Tcf7_2/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCTGRTTTRAAAWCAG
-CCGTATTATAAACAA
 A T G C A G T C C G A T C T A G T C G A G A C T A G C T C G A T C T G A C G T A C G T A G T C A C G T A G T A C G T C A T A C G
A C G T G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CCTGRTTTRAAAWCAG-
------AAGTAAACAAA
 A T G C A G T C C G A T C T A G T C G A G A C T A G C T C G A T C T G A C G T A C G T A G T C A C G T A G T A C G T C A T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:CCTGRTTTRAAAWCAG
--------GTAAACAG
 A T G C A G T C C G A T C T A G T C G A G A C T A G C T C G A T C T G A C G T A C G T A G T C A C G T A G T A C G T C A T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G