Information for 9-GATCTAATCAAGT (Motif 12)

A C T G G T C A C G A T A T G C A C G T C G T A C G T A A C G T A G T C C G T A G T C A C T A G C G A T
Reverse Opposite:
C G T A A G T C C A G T A C G T C T A G C G T A A C G T A C G T C G T A A T C G C G T A A C G T A G T C
p-value:1e-13
log p-value:-3.146e+01
Information Content per bp:1.841
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.7 +/- 27.2bp
Average Position of motif in Background39.5 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DUXA/MA0884.1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GATCTAATCAAGT
CTAATTTAATCAA--
 A C G T A C G T A C T G G T C A C G A T A T G C A C G T C G T A C G T A A C G T A G T C C G T A G T C A C T A G C G A T
G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A A C G T A C G T

PH0014.1_Cphx/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GATCTAATCAAGT
ATGATCGAATCAAA-
 A C G T A C G T A C T G G T C A C G A T A T G C A C G T C G T A C G T A A C G T A G T C C G T A G T C A C T A G C G A T
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A A C G T

Lhx8/MA0705.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GATCTAATCAAGT
---CTAATTAG--
 A C T G G T C A C G A T A T G C A C G T C G T A C G T A A C G T A G T C C G T A G T C A C T A G C G A T
A C G T A C G T A C G T A G T C A G C T T C G A C G T A A C G T A G C T C T G A T C A G A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GATCTAATCAAGT---
CGACCCAATCAACGGTG
 A C G T A C T G G T C A C G A T A T G C A C G T C G T A C G T A A C G T A G T C C G T A G T C A C T A G C G A T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GATCTAATCAAGT
-ADBTAATTAR--
 A C T G G T C A C G A T A T G C A C G T C G T A C G T A A C G T A G T C C G T A G T C A C T A G C G A T
A C G T C G T A C G T A A G C T G A C T T G C A G T C A A C G T A G C T C T G A T C A G A C G T A C G T

EVX2/MA0888.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GATCTAATCAAGT
--NNTAATTANN-
 A C T G G T C A C G A T A T G C A C G T C G T A C G T A A C G T A G T C C G T A G T C A C T A G C G A T
A C G T A C G T T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C A C G T

DUX4/MA0468.1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GATCTAATCAAGT
TAATTTAATCA---
 A C G T A C T G G T C A C G A T A T G C A C G T C G T A C G T A A C G T A G T C C G T A G T C A C T A G C G A T
G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A A C G T A C G T A C G T

PB0125.1_Gata3_2/Jaspar

Match Rank:8
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------GATCTAATCAAGT--
TTTTGTAGATTTTATCGACTTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G A T A T G C A C G T C G T A C G T A A C G T A G T C C G T A G T C A C T A G C G A T A C G T A C G T
G A C T A C G T G C A T C A G T T C A G A G C T G C T A C T A G G C T A G A C T C G A T A C G T G A C T C T G A A C G T G A T C C T A G T C G A A T G C C G A T G C A T G T C A

VAX2/MA0723.1/Jaspar

Match Rank:9
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GATCTAATCAAGT
---CTAATTAC--
 A C T G G T C A C G A T A T G C A C G T C G T A C G T A A C G T A G T C C G T A G T C A C T A G C G A T
A C G T A C G T A C G T A G T C G A C T G T C A G C T A C G A T C A G T C T G A A G T C A C G T A C G T

EVX1/MA0887.1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GATCTAATCAAGT
--GNTAATTANN-
 A C T G G T C A C G A T A T G C A C G T C G T A C G T A A C G T A G T C C G T A G T C A C T A G C G A T
A C G T A C G T A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C A C G T