Information for 14-AGAAYKTGTCATA (Motif 21)

C G T A A C T G C G T A C G T A A G C T A C G T A C G T A C T G A C G T A G T C C G T A C G A T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C T G C G T A A G T C C G T A G T A C C T A G A C G T C G A T A G T C A C G T
p-value:1e-11
log p-value:-2.552e+01
Information Content per bp:1.893
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.4 +/- 9.1bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0105.1_Meis3/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGAAYKTGTCATA--
AATTACCTGTCAATAC
 A C G T C G T A A C T G C G T A C G T A A G C T A C G T A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:AGAAYKTGTCATA
-----NTGTCAN-
 C G T A A C T G C G T A C G T A A G C T A C G T A C G T A C T G A C G T A G T C C G T A C G A T C G T A
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGAAYKTGTCATA--
AACGAGCTGTCAATAC
 A C G T C G T A A C T G C G T A C G T A A G C T A C G T A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0104.1_Meis2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGAAYKTGTCATA--
AAAGACCTGTCAATAC
 A C G T C G T A A C T G C G T A C G T A A G C T A C G T A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AGAAYKTGTCATA
----CCTGTCAA-
 C G T A A C T G C G T A C G T A A G C T A C G T A C G T A C T G A C G T A G T C C G T A C G A T C G T A
A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AGAAYKTGTCATA
---AGGTGTGAAM
 C G T A A C T G C G T A C G T A A G C T A C G T A C G T A C T G A C G T A G T C C G T A C G A T C G T A
A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AGAAYKTGTCATA
---ARNTGACA--
 C G T A A C T G C G T A C G T A A G C T A C G T A C G T A C T G A C G T A G T C C G T A C G A T C G T A
A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGAAYKTGTCATA--
AACTAGCTGTCAATAC
 A C G T C G T A A C T G C G T A C G T A A G C T A C G T A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGAAYKTGTCATA--
AAGCACCTGTCAATAT
 A C G T C G T A A C T G C G T A C G T A A G C T A C G T A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGAAYKTGTCATA--
AAAGACCTGTCAATCC
 A C G T C G T A A C T G C G T A C G T A A G C T A C G T A C G T A C T G A C G T A G T C C G T A C G A T C G T A A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C