Information for 20-CTGGTGAGTGCAGAGT (Motif 31)

T A G C A C G T A C T G A C T G A C G T A C T G C G T A C A T G A C G T C T A G A G T C C G T A T A C G C G T A C T A G C G A T
Reverse Opposite:
C G T A A G T C G A C T A T G C G C A T C T A G A G T C G T C A G T A C G C A T G T A C G T C A T A G C A G T C C G T A A C T G
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.677
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif34.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets58.9 +/- 20.4bp
Average Position of motif in Background50.6 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGGTGAGTGCAGAGT
CCCCCTGCTGTG--------
 A C G T A C G T A C G T A C G T T A G C A C G T A C T G A C T G A C G T A C T G C G T A C A T G A C G T C T A G A G T C C G T A T A C G C G T A C T A G C G A T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTGGTGAGTGCAGAGT
TNTCCTGCTGTGNNG-----
 A C G T A C G T A C G T A C G T T A G C A C G T A C T G A C T G A C G T A C T G C G T A C A T G A C G T C T A G A G T C C G T A T A C G C G T A C T A G C G A T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTGGTGAGTGCAGAGT
CAGGTGAGG-------
 T A G C A C G T A C T G A C T G A C G T A C T G C G T A C A T G A C G T C T A G A G T C C G T A T A C G C G T A C T A G C G A T
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTGGTGAGTGCAGAGT
TCNCCTGCTGNGNNN-----
 A C G T A C G T A C G T A C G T T A G C A C G T A C T G A C T G A C G T A C T G C G T A C A T G A C G T C T A G A G T C C G T A T A C G C G T A C T A G C G A T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTGGTGAGTGCAGAGT----
---NNNANTGCAGTGCNNTT
 T A G C A C G T A C T G A C T G A C G T A C T G C G T A C A T G A C G T C T A G A G T C C G T A T A C G C G T A C T A G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTGGTGAGTGCAGAGT
CCTGCTGAGH-------
 A C G T T A G C A C G T A C T G A C T G A C G T A C T G C G T A C A T G A C G T C T A G A G T C C G T A T A C G C G T A C T A G C G A T
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------CTGGTGAGTGCAGAGT
GGCCYCCTGCTGDGH-------
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C A C G T A C T G A C T G A C G T A C T G C G T A C A T G A C G T C T A G A G T C C G T A T A C G C G T A C T A G C G A T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CTGGTGAGTGCAGAGT
AAANTGCTGACTNAG----
 A C G T A C G T A C G T T A G C A C G T A C T G A C T G A C G T A C T G C G T A C A T G A C G T C T A G A G T C C G T A T A C G C G T A C T A G C G A T
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CTGGTGAGTGCAGAGT
AATTTGCTGAC--------
 A C G T A C G T A C G T T A G C A C G T A C T G A C T G A C G T A C T G C G T A C A T G A C G T C T A G A G T C C G T A T A C G C G T A C T A G C G A T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CTGGTGAGTGCAGAGT
NNTCCTGCTGTGNNN-----
 A C G T A C G T A C G T A C G T T A G C A C G T A C T G A C T G A C G T A C T G C G T A C A T G A C G T C T A G A G T C C G T A T A C G C G T A C T A G C G A T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T A C G T