Information for 6-TTRACAAATATTAGCT (Motif 8)

C G A T G C A T C T A G C T G A A G T C G C T A C G T A C G T A C G A T G T C A A G C T G A C T G T C A C A T G A G T C G A C T
Reverse Opposite:
C T G A C T A G G A T C C A G T C G T A C T G A A C G T C G T A C G A T A C G T C A G T C T A G G A C T A G T C C G T A G C T A
p-value:1e-15
log p-value:-3.502e+01
Information Content per bp:1.659
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif25.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets59.4 +/- 21.1bp
Average Position of motif in Background47.6 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTRACAAATATTAGCT
NNTNNCAATATTAG--
 C G A T G C A T C T A G C T G A A G T C G C T A C G T A C G T A C G A T G T C A A G C T G A C T G T C A C A T G A G T C G A C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTRACAAATATTAGCT
NNTNNCAATATTAG--
 C G A T G C A T C T A G C T G A A G T C G C T A C G T A C G T A C G A T G T C A A G C T G A C T G T C A C A T G A G T C G A C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTRACAAATATTAGCT
GTAAACAAT--------
 A C G T C G A T G C A T C T A G C T G A A G T C G C T A C G T A C G T A C G A T G T C A A G C T G A C T G T C A C A T G A G T C G A C T
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTRACAAATATTAGCT
NNCNNAACAATTNT-----
 A C G T A C G T A C G T C G A T G C A T C T A G C T G A A G T C G C T A C G T A C G T A C G A T G T C A A G C T G A C T G T C A C A T G A G T C G A C T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TTRACAAATATTAGCT
-----AAATCACAGCA
 C G A T G C A T C T A G C T G A A G T C G C T A C G T A C G T A C G A T G T C A A G C T G A C T G T C A C A T G A G T C G A C T
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTRACAAATATTAGCT
TNCNNAACAATTTTTNC--
 A C G T A C G T A C G T C G A T G C A T C T A G C T G A A G T C G C T A C G T A C G T A C G A T G T C A A G C T G A C T G T C A C A T G A G T C G A C T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TTRACAAATATTAGCT
ACCGTGACTAATTNN----
 A C G T A C G T A C G T C G A T G C A T C T A G C T G A A G T C G C T A C G T A C G T A C G A T G T C A A G C T G A C T G T C A C A T G A G T C G A C T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A A C G T A C G T A C G T A C G T

Hoxd8/MA0910.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTRACAAATATTAGCT-
TAAATAATTAATGGCTA
 C G A T G C A T C T A G C T G A A G T C G C T A C G T A C G T A C G A T G T C A A G C T G A C T G T C A C A T G A G T C G A C T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0080.1_Hoxd8/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTRACAAATATTAGCT-
TAAATAATTAATGGCTA
 C G A T G C A T C T A G C T G A A G T C G C T A C G T A C G T A C G A T G T C A A G C T G A C T G T C A C A T G A G T C G A C T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PB0172.1_Sox1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTRACAAATATTAGCT
NNNTAACAATTATAN---
 A C G T A C G T C G A T G C A T C T A G C T G A A G T C G C T A C G T A C G T A C G A T G T C A A G C T G A C T G T C A C A T G A G T C G A C T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T A C G T