Information for 1-CHRGGTCACNSTGACC (Motif 1)

A G T C G T A C C T G A C A T G C T A G C A G T A T G C C T G A T A G C A T C G A T C G G C A T A T C G G T C A G A T C G T A C
Reverse Opposite:
C A T G C T A G C A G T A T G C C G T A T A G C T A C G A T C G G A C T T A C G G T C A G A T C G T A C G A C T C A T G T C A G
p-value:1e-88
log p-value:-2.043e+02
Information Content per bp:1.564
Number of Target Sequences with motif132.0
Percentage of Target Sequences with motif17.79%
Number of Background Sequences with motif793.0
Percentage of Background Sequences with motif1.70%
Average Position of motif in Targets51.9 +/- 20.7bp
Average Position of motif in Background48.2 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.98
Offset:1
Orientation:forward strand
Alignment:CHRGGTCACNSTGACC
-NAGGTCACNNTGACC
 A G T C G T A C C T G A C A T G C T A G C A G T A T G C C T G A T A G C A T C G A T C G G C A T A T C G G T C A G A T C G T A C
A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.93
Offset:2
Orientation:forward strand
Alignment:CHRGGTCACNSTGACC-
--AGGTCACCCTGACCT
 A G T C G T A C C T G A C A T G C T A G C A G T A T G C C T G A T A G C A T C G A T C G G C A T A T C G G T C A G A T C G T A C A C G T
A C G T A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:CHRGGTCACNSTGACC--
-CAGGTCACCGTGACCTT
 A G T C G T A C C T G A C A T G C T A G C A G T A T G C C T G A T A G C A T C G A T C G G C A T A T C G G T C A G A T C G T A C A C G T A C G T
A C G T T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

PPARG/MA0066.1/Jaspar

Match Rank:4
Score:0.84
Offset:0
Orientation:forward strand
Alignment:CHRGGTCACNSTGACC----
GTAGGTCACGGTGACCTACT
 A G T C G T A C C T G A C A T G C T A G C A G T A T G C C T G A T A G C A T C G A T C G G C A T A T C G G T C A G A T C G T A C A C G T A C G T A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CHRGGTCACNSTGACC-
-NAGAACAGNCTGTNCT
 A G T C G T A C C T G A C A T G C T A G C A G T A T G C C T G A T A G C A T C G A T C G G C A T A T C G G T C A G A T C G T A C A C G T
A C G T T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CHRGGTCACNSTGACC
--AGGTCA--------
 A G T C G T A C C T G A C A T G C T A G C A G T A T G C C T G A T A G C A T C G A T C G G C A T A T C G G T C A G A T C G T A C
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CHRGGTCACNSTGACC
-VAGRACAKWCTGTYC
 A G T C G T A C C T G A C A T G C T A G C A G T A T G C C T G A T A G C A T C G A T C G G C A T A T C G G T C A G A T C G T A C
A C G T T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CHRGGTCACNSTGACC
TRAGGTCA--------
 A G T C G T A C C T G A C A T G C T A G C A G T A T G C C T G A T A G C A T C G A T C G G C A T A T C G G T C A G A T C G T A C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CHRGGTCACNSTGACC
GTAGGTCACTGGGTCA
 A G T C G T A C C T G A C A T G C T A G C A G T A T G C C T G A T A G C A T C G A T C G G C A T A T C G G T C A G A T C G T A C
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CHRGGTCACNSTGACC-
-NAGNACANNNTGTNCT
 A G T C G T A C C T G A C A T G C T A G C A G T A T G C C T G A T A G C A T C G A T C G G C A T A T C G G T C A G A T C G T A C A C G T
A C G T T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T