Information for 12-TCTTGGCCTT (Motif 39)

A C G T G A T C G C A T A C G T C T A G A C T G A G T C A G T C G A C T C G A T
Reverse Opposite:
G C T A C G T A A C T G C T A G G T A C A G T C G T C A C G T A C T A G T G C A
p-value:1e-7
log p-value:-1.657e+01
Information Content per bp:1.826
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.96%
Number of Background Sequences with motif342.6
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets47.5 +/- 23.2bp
Average Position of motif in Background49.6 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TCTTGGCCTT-
-BNTGDCCTTG
 A C G T G A T C G C A T A C G T C T A G A C T G A G T C A G T C G A C T C G A T A C G T
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TCTTGGCCTT
-CTAGGCCT-
 A C G T G A T C G C A T A C G T C T A G A C T G A G T C A G T C G A C T C G A T
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:TCTTGGCCTT---
---TGACCTTGAN
 A C G T G A T C G C A T A C G T C T A G A C T G A G T C A G T C G A C T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TCTTGGCCTT
-CNAGGCCT-
 A C G T G A T C G C A T A C G T C T A G A C T G A G T C A G T C G A C T C G A T
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TCTTGGCCTT
--GTGACCTT
 A C G T G A T C G C A T A C G T C T A G A C T G A G T C A G T C G A C T C G A T
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TCTTGGCCTT---
---TGACCTTGAV
 A C G T G A T C G C A T A C G T C T A G A C T G A G T C A G T C G A C T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TCTTGGCCTT
--TTGGCA--
 A C G T G A T C G C A T A C G T C T A G A C T G A G T C A G T C G A C T C G A T
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCTTGGCCTT
-NTTGGCANN
 A C G T G A T C G C A T A C G T C T A G A C T G A G T C A G T C G A C T C G A T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCTTGGCCTT--
--ATGACCTTGA
 A C G T G A T C G C A T A C G T C T A G A C T G A G T C A G T C G A C T C G A T A C G T A C G T
A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TCTTGGCCTT--
--NTGACCTTGA
 A C G T G A T C G C A T A C G T C T A G A C T G A G T C A G T C G A C T C G A T A C G T A C G T
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A