Information for 3-TTGTTTGCWT (Motif 2)

A G C T A C G T C T A G A C G T C A G T A C G T C T A G G A T C G C A T G A C T
Reverse Opposite:
C T G A C G T A C T A G A G T C C G T A G T C A C G T A A G T C C G T A T C G A
p-value:1e-35
log p-value:-8.124e+01
Information Content per bp:1.718
Number of Target Sequences with motif112.0
Percentage of Target Sequences with motif15.09%
Number of Background Sequences with motif1724.0
Percentage of Background Sequences with motif3.69%
Average Position of motif in Targets51.0 +/- 27.2bp
Average Position of motif in Background50.7 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.88
Offset:1
Orientation:forward strand
Alignment:TTGTTTGCWT
-TGTTTATTT
 A G C T A C G T C T A G A C G T C A G T A C G T C T A G G A T C G C A T G A C T
A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

FOXP2/MA0593.1/Jaspar

Match Rank:2
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTTGCWT
TNTGTTTACTT
 A C G T A G C T A C G T C T A G A C G T C A G T A C G T C T A G G A T C G C A T G A C T
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T

FOXC2/MA0846.1/Jaspar

Match Rank:3
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTTGCWT-
TTTGTTTACTTA
 A C G T A G C T A C G T C T A G A C G T C A G T A C G T C T A G G A T C G C A T G A C T A C G T
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:TTGTTTGCWT-
-TGTTTACTTT
 A G C T A C G T C T A G A C G T C A G T A C G T C T A G G A T C G C A T G A C T A C G T
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:TTGTTTGCWT-
-TGTTTACTTT
 A G C T A C G T C T A G A C G T C A G T A C G T C T A G G A T C G C A T G A C T A C G T
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--TTGTTTGCWT---
CTTTGTTTACTTTTN
 A C G T A C G T A G C T A C G T C T A G A C G T C A G T A C G T C T A G G A T C G C A T G A C T A C G T A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

Foxj3/MA0851.1/Jaspar

Match Rank:7
Score:0.84
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTTGCWT---
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A C G T A G C T A C G T C T A G A C G T C A G T A C G T C T A G G A T C G C A T G A C T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:8
Score:0.84
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTTGCWT---
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A C G T A G C T A C G T C T A G A C G T C A G T A C G T C T A G G A T C G C A T G A C T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

Foxj2/MA0614.1/Jaspar

Match Rank:9
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TTGTTTGCWT
TTGTTTAC--
 A G C T A C G T C T A G A C G T C A G T A C G T C T A G G A T C G C A T G A C T
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TTGTTTGCWT--
NTGTTTAYATWW
 A G C T A C G T C T A G A C G T C A G T A C G T C T A G G A T C G C A T G A C T A C G T A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A