Homer de novo Motif Results (hs_fibroblast_7250_undef_PAX3_SRX1878949_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 396
Total background sequences = 47842
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C T G A C G T A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C T G G T C A A C G T A T G C G A C T A G T C G A T C 1e-12-2.891e+011.26%0.00%14.0bp (0.0bp)PB0130.1_Gm397_2/Jaspar(0.733)
More Information | Similar Motifs Found
motif file (matrix)
2 * A G C T T A G C C G T A A C T G C T A G C A G T A C T G C G A T A T G C A G T C T G C A A C G T A C T G C G T A A T C G A C T G 1e-11-2.560e+011.77%0.02%17.6bp (21.7bp)ZEB1/MA0103.2/Jaspar(0.574)
More Information | Similar Motifs Found
motif file (matrix)
3 * A C G T A G C T A C T G A G T C A G T C C T G A A T G C A C G T C T G A C G T A A C G T A C T G C G T A A C T G G T A C A C G T 1e-10-2.343e+011.26%0.01%9.5bp (21.3bp)POU6F2/MA0793.1/Jaspar(0.614)
More Information | Similar Motifs Found
motif file (matrix)
4 * C T A G G T A C A G T C C G T A C G T A A G T C T A G C A G T C A G T C C G T A T A G C A G T C C T G A A C T G C T A G A G C T 1e-9-2.247e+011.01%0.00%14.5bp (21.6bp)SCRT1/MA0743.1/Jaspar(0.553)
More Information | Similar Motifs Found
motif file (matrix)
5 * G T C A A G T C A G T C A G T C C G T A A C T G C T G A A G T C A T C G G T A C A C T G A C G T A G T C T A C G A G T C C T A G 1e-9-2.247e+011.01%0.00%28.1bp (0.0bp)Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer(0.691)
More Information | Similar Motifs Found
motif file (matrix)
6 * A G T C C G T A T A C G C T G A T A G C A T C G C G T A C T G A C G T A C T A G C G T A A G T C A G T C C G T A A C T G A T G C 1e-9-2.247e+011.01%0.00%26.0bp (0.0bp)ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer(0.584)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C T G A G T C A G T C A G C T A C G T G C T A A G T C C G T A C T A G T C G A 1e-9-2.179e+012.78%0.19%27.9bp (27.6bp)PH0158.1_Rhox11_2/Jaspar(0.630)
More Information | Similar Motifs Found
motif file (matrix)
8 * G A C T A T G C C G A T C A G T G T C A T G A C G C T A A C G T A C G T G A C T 1e-8-2.027e+014.29%0.64%25.2bp (27.8bp)Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer(0.730)
More Information | Similar Motifs Found
motif file (matrix)
9 * C G A T C T A G A C T G C G T A C T G A C G T A C T G A A T G C C G A T C G T A 1e-8-1.874e+012.53%0.19%31.5bp (25.9bp)NFATC2/MA0152.1/Jaspar(0.829)
More Information | Similar Motifs Found
motif file (matrix)
10 * A C T G G C A T A C T G A T G C C G T A A C T G C T A G A C T G A C T G C G T A A C T G C T G A A T C G A C T G G A C T T A C G 1e-7-1.798e+011.26%0.02%28.2bp (34.7bp)Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer(0.651)
More Information | Similar Motifs Found
motif file (matrix)
11 * G T A C A C T G A G T C A G T C A G C T A C G T A G T C A C G T A C T G A C G T A G T C G T C A A C T G 1e-7-1.695e+011.01%0.01%25.6bp (10.0bp)PB0205.1_Zic1_2/Jaspar(0.676)
More Information | Similar Motifs Found
motif file (matrix)
12 * G T A C T A C G A G T C A C G T A T C G A C G T A C T G C G T A A C G T A T G C A G T C A G T C A G T C A G C T A G T C C G A T 1e-7-1.695e+011.01%0.01%29.1bp (24.2bp)TCF7L2/MA0523.1/Jaspar(0.634)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C G T T A C G G A T C T G C A G C A T A T C G T G A C C T A G A T C G C A T G A C T G C T G A T C G A A C T G A G T C A G T C 1e-7-1.669e+014.29%0.83%23.3bp (27.2bp)GCM2/MA0767.1/Jaspar(0.525)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C G T C T A G A C T G C G T A C A T G A C T G A C G T A G C T A C G T C T A G A C T G A C T G G A C T C G A T A C T G A C T G 1e-7-1.656e+011.26%0.03%26.0bp (18.9bp)PB0167.1_Sox13_2/Jaspar(0.593)
More Information | Similar Motifs Found
motif file (matrix)
15 * G A C T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A G T C A C T G C T A G A G T C A C T G 1e-7-1.626e+010.76%0.00%19.4bp (19.6bp)PB0206.1_Zic2_2/Jaspar(0.587)
More Information | Similar Motifs Found
motif file (matrix)
16 * A G T C A C G T A G T C C G T A C T A G A G T C A G T C C G T A A C T G A C G T A G T C G T C A C G T A 1e-7-1.626e+010.76%0.00%26.3bp (0.0bp)POL004.1_CCAAT-box/Jaspar(0.650)
More Information | Similar Motifs Found
motif file (matrix)
17 * A G T C A G T C A G T C A C G T A C T G A G T C C T G A A C T G C T G A A C T G C G T A A G T C A C T G C T G A C G T A A C T G 1e-7-1.626e+010.76%0.00%29.1bp (0.0bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.607)
More Information | Similar Motifs Found
motif file (matrix)
18 * C T G A C T A G A C T G C T G A C G A T C A T G A T G C T G C A A T G C C G T A A C T G C G T A A C T G A G T C C G T A A C G T 1e-7-1.626e+010.76%0.00%12.4bp (0.0bp)POL009.1_DCE_S_II/Jaspar(0.502)
More Information | Similar Motifs Found
motif file (matrix)
19 * A T C G A C G T A T G C A C G T C G T A A C G T G T C A A G T C C G T A A C G T A G T C C G T A C T A G A G T C C G A T A C T G 1e-7-1.626e+010.76%0.00%21.9bp (0.0bp)TFAP4/MA0691.1/Jaspar(0.633)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C T G C T G A A T C G G T C A A G T C A G T C C G T A A G T C C G T A T C G A G T A C A G T C C G T A A G T C A G T C A G T C 1e-7-1.626e+010.76%0.00%16.7bp (0.0bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.640)
More Information | Similar Motifs Found
motif file (matrix)
21 * C G T A C G T A C G T A C G T A A C G T A C T G A C G T A C T G A C T G A C T G A C G T A C T G A C T G A G T C A G T C A C T G 1e-7-1.626e+010.76%0.00%20.9bp (0.0bp)GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer(0.633)
More Information | Similar Motifs Found
motif file (matrix)
22 * A T C G A G T C A G T C A G T C A T G C C G A T A G C T G T C A C T A G T C A G C G T A C T A G A C T G A C G T A T G C T G C A 1e-7-1.626e+010.76%0.00%26.6bp (0.0bp)CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer(0.592)
More Information | Similar Motifs Found
motif file (matrix)
23 * C G T A A G T C G C T A A G T C C G T A A T C G T G A C A G T C A T G C A T G C A G C T A G T C G T C A 1e-6-1.546e+011.26%0.03%27.0bp (33.1bp)PB0151.1_Myf6_2/Jaspar(0.682)
More Information | Similar Motifs Found
motif file (matrix)
24 * A G C T A G T C G T C A A T G C G C T A A T C G A T G C G C A T T A G C A G C T A C G T A C T G A C T G T G C A T A G C A C G T 1e-6-1.490e+013.28%0.54%23.8bp (29.0bp)MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer(0.585)
More Information | Similar Motifs Found
motif file (matrix)
25 * A G T C A G T C A G T C A C T G G T C A A G T C C G T A A C T G A G T C A G T C G T C A A T C G A C T G 1e-6-1.457e+011.26%0.04%23.5bp (30.5bp)PB0149.1_Myb_2/Jaspar(0.606)
More Information | Similar Motifs Found
motif file (matrix)
26 * C A G T T A C G A C G T T C G A G A C T G A T C T A C G C G T A A G T C A T G C 1e-6-1.431e+015.56%1.59%24.7bp (31.3bp)HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer(0.685)
More Information | Similar Motifs Found
motif file (matrix)
27 * C G T A A T C G A G T C A G T C A C G T A C T G A C T G A T C G A G T C A G T C A C G T A C G T A G T C 1e-6-1.419e+010.76%0.01%29.8bp (14.3bp)ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer(0.677)
More Information | Similar Motifs Found
motif file (matrix)
28 * C A T G C G A T A C T G C G T A G A C T G T A C C T G A A G T C A T C G T A G C 1e-5-1.320e+012.78%0.44%25.3bp (34.0bp)PH0016.1_Cux1_1/Jaspar(0.684)
More Information | Similar Motifs Found
motif file (matrix)
29 * A C T G A C T G A C G T A C T G C T A G T C G A A G C T A G T C A G C T G C A T C T A G A C G T A C T G A C T G C T A G A C T G 1e-5-1.298e+010.76%0.01%28.5bp (15.5bp)ZNF354C/MA0130.1/Jaspar(0.528)
More Information | Similar Motifs Found
motif file (matrix)
30 * A G T C G T A C C G T A A C G T A C T G C T G A C T A G A C T G T A C G C G T A C G T A C G T A A C T G 1e-5-1.173e+011.01%0.03%24.5bp (33.8bp)PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer(0.635)
More Information | Similar Motifs Found
motif file (matrix)
31 * A G T C G T C A T C G A T A C G G T C A C G T A A G T C C T G A T C G A C T G A A T C G A T G C A T C G 1e-5-1.165e+012.02%0.25%23.2bp (29.5bp)Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer(0.670)
More Information | Similar Motifs Found
motif file (matrix)
32 * A C G T T C A G C A G T C T A G C G A T A T C G C A G T A C T G A C T G T A C G 1e-4-1.130e+0111.36%5.74%24.6bp (33.4bp)Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer(0.769)
More Information | Similar Motifs Found
motif file (matrix)
33 * A G T C A C G T A C T G A G C T A C T G A C T G C T G A A C T G C G T A A C G T 1e-4-1.085e+011.26%0.08%26.3bp (32.2bp)ZNF354C/MA0130.1/Jaspar(0.683)
More Information | Similar Motifs Found
motif file (matrix)
34 * A C G T A T C G A G T C A C G T A G T C A G T C A G T C A G T C C T A G A T C G C G T A A G T C C G T A A C T G C G T A C T G A 1e-4-1.034e+010.51%0.00%10.0bp (0.0bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.617)
More Information | Similar Motifs Found
motif file (matrix)
35 * A C T G A C T G C T G A A C G T T A C G C G A T A C G T A T G C C G A T A C T G 1e-4-1.004e+013.03%0.73%24.5bp (29.3bp)PB0181.1_Spdef_2/Jaspar(0.647)
More Information | Similar Motifs Found
motif file (matrix)
36 * A G T C A G T C C G T A A C G T A G T C A G T C A G T C A C G T A C T G A C T G A C T G C G T A A C T G 1e-3-8.957e+000.51%0.01%24.1bp (11.4bp)PB0195.1_Zbtb3_2/Jaspar(0.647)
More Information | Similar Motifs Found
motif file (matrix)
37 * A C T G G T A C A G T C T A G C A T G C A C G T A G C T T C G A T A C G A G T C A G C T C T G A A C T G 1e-3-8.754e+001.26%0.13%21.4bp (24.4bp)LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer(0.551)
More Information | Similar Motifs Found
motif file (matrix)
38 * C G T A A G T C A G T C A C T G A C T G A G T C A G T C A G T C C G T A C G T A 1e-3-8.151e+000.51%0.01%11.4bp (13.1bp)PB0110.1_Bcl6b_2/Jaspar(0.630)
More Information | Similar Motifs Found
motif file (matrix)
39 * A C T G A G T C A C T G A C G T A G T C A C T G A G T C A C T G A G T C C G T A 1e-2-4.822e+000.25%0.00%31.1bp (25.2bp)PB0199.1_Zfp161_2/Jaspar(0.728)
More Information | Similar Motifs Found
motif file (matrix)
40 * A G T C C G T A A C T G A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T C G T A 1e-2-4.822e+000.25%0.00%35.1bp (0.0bp)Zfx/MA0146.2/Jaspar(0.602)
More Information | Similar Motifs Found
motif file (matrix)
41 * A C G T A G T C A C G T C G T A A G C T A T G C A G T C A G T C A C T G C G T A C G T A C G T A A C T G 1e-2-4.822e+000.25%0.00%0.0bp (0.0bp)ELF4/MA0641.1/Jaspar(0.599)
More Information | Similar Motifs Found
motif file (matrix)
42 * A C G T A C T G A G T C A C G T A G T C C A T G C T A G A G C T A C T G A C T G A C G T A G T C A G T C C G A T A C T G A T G C 1e-2-4.822e+000.25%0.00%0.0bp (0.0bp)ZBTB7C/MA0695.1/Jaspar(0.650)
More Information | Similar Motifs Found
motif file (matrix)
43 * C G T A A C T G A C T G C T A G C T G A A G T C A G T C A G C T A G T C A C T G C G T A A G T C C T A G A T C G A G T C A G T C 1e-2-4.822e+000.25%0.00%0.0bp (0.0bp)PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer(0.519)
More Information | Similar Motifs Found
motif file (matrix)