Information for 14-CAAGAACAAAGCG (Motif 31)

A G T C G T C A T C G A T A C G G T C A C G T A A G T C C T G A T C G A C T G A A T C G A T G C A T C G
Reverse Opposite:
A T G C A T C G A T G C A G C T A C G T A G C T C T A G C G A T A C G T A T G C A C G T A C G T C T A G
p-value:1e-5
log p-value:-1.165e+01
Information Content per bp:1.711
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif122.2
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets55.8 +/- 23.2bp
Average Position of motif in Background48.9 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CAAGAACAAAGCG
--GGAACAAAGR-
 A G T C G T C A T C G A T A C G G T C A C G T A A G T C C T G A T C G A C T G A A T C G A T G C A T C G
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAAGAACAAAGCG
CCAGGAACAG----
 A C G T A G T C G T C A T C G A T A C G G T C A C G T A A G T C C T G A T C G A C T G A A T C G A T G C A T C G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CAAGAACAAAGCG
--VRRACAAWGG-
 A G T C G T C A T C G A T A C G G T C A C G T A A G T C C T G A T C G A C T G A A T C G A T G C A T C G
A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CAAGAACAAAGCG
--AAAACAAAGG-
 A G T C G T C A T C G A T A C G G T C A C G T A A G T C C T G A T C G A C T G A A T C G A T G C A T C G
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CAAGAACAAAGCG
-----ACAAAG--
 A G T C G T C A T C G A T A C G G T C A C G T A A G T C C T G A T C G A C T G A A T C G A T G C A T C G
A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAAGAACAAAGCG---
AGAAGAACAAAGGACTA
 A C G T A G T C G T C A T C G A T A C G G T C A C G T A A G T C C T G A T C G A C T G A A T C G A T G C A T C G A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAAGAACAAAGCG---
ATAAGAACAAAGGACTA
 A C G T A G T C G T C A T C G A T A C G G T C A C G T A A G T C C T G A T C G A C T G A A T C G A T G C A T C G A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CAAGAACAAAGCG----
-----ACAAAGGNBCCT
 A G T C G T C A T C G A T A C G G T C A C G T A A G T C C T G A T C G A C T G A A T C G A T G C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAAGAACAAAGCG
--AAAACAATGG-
 A G T C G T C A T C G A T A C G G T C A C G T A A G T C C T G A T C G A C T G A A T C G A T G C A T C G
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CAAGAACAAAGCG
---GAACAATGGN
 A G T C G T C A T C G A T A C G G T C A C G T A A G T C C T G A T C G A C T G A A T C G A T G C A T C G
A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G