Information for 23-CAGGCCCCAGATA (Motif 40)

A G T C C G T A A C T G A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G T C A G T C A C G T A C T G
p-value:1e-2
log p-value:-4.822e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 35.1bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGGCCCCAGATA-
CAGGCCNNGGCCNN
 A G T C C G T A A C T G A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T C G T A A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

INSM1/MA0155.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAGGCCCCAGATA
-CGCCCCCTGACA
 A G T C C G T A A C T G A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T C G T A
A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCCCCAGATA
CTAGGCCT------
 A C G T A G T C C G T A A C T G A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T C G T A
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.55
Offset:8
Orientation:forward strand
Alignment:CAGGCCCCAGATA---
--------AGATAASR
 A G T C C G T A A C T G A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCCCCAGATA
CNAGGCCT------
 A C G T A G T C C G T A A C T G A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T C G T A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CAGGCCCCAGATA----
-------CAGATAAGGN
 A G T C C G T A A C T G A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

GATA5/MA0766.1/Jaspar

Match Rank:7
Score:0.54
Offset:8
Orientation:forward strand
Alignment:CAGGCCCCAGATA---
--------AGATAAGA
 A G T C C G T A A C T G A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A

GATA3/MA0037.2/Jaspar

Match Rank:8
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CAGGCCCCAGATA---
--------AGATAAGA
 A G T C C G T A A C T G A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CAGGCCCCAGATA----
-------NAGATAAGNN
 A G T C C G T A A C T G A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAGGCCCCAGATA
GTGGGCCCCA----
 A C G T A G T C C G T A A C T G A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T C G T A
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T