Information for 3-TCCATGCTCGGCG (Motif 15)

G A C T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A G T C A C T G C T A G A G T C A C T G
Reverse Opposite:
A G T C C T A G A G T C G T A C A C T G C G T A A C T G A G T C G T C A A C G T A C T G A C T G C G T A
p-value:1e-7
log p-value:-1.626e+01
Information Content per bp:1.930
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.6 +/- 19.4bp
Average Position of motif in Background41.0 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCCATGCTCGGCG-
TCNCCTGCTGNGNNN
 A C G T G A C T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A G T C A C T G C T A G A G T C A C T G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCCATGCTCGGCG
NNGCNCTGCGCGGC-
 A C G T A C G T G A C T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A G T C A C T G C T A G A G T C A C T G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCCATGCTCGGCG-
TNTCCTGCTGTGNNG
 A C G T G A C T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A G T C A C T G C T A G A G T C A C T G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCCATGCTCGGCG
CCCCCTGCTGTG--
 A C G T G A C T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A G T C A C T G C T A G A G T C A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCCATGCTCGGCG
--CCTGCTGAGH-
 G A C T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A G T C A C T G C T A G A G T C A C T G
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCCATGCTCGGCG-
NNTCCTGCTGTGNNN
 A C G T G A C T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A G T C A C T G C T A G A G T C A C T G A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TCCATGCTCGGCG
-----GCTCCG--
 G A C T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A G T C A C T G C T A G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TCCATGCTCGGCG
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T G A C T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A G T C A C T G C T A G A G T C A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TCCATGCTCGGCG--
-----GCTCGGSCTC
 G A C T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A G T C A C T G C T A G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TCCATGCTCGGCG--
NGTCACGCTTGGCTGC
 A C G T G A C T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A G T C A C T G C T A G A G T C A C T G A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C