Information for 1-GCCTTACAGA (Motif 7)

A C T G A G T C A G T C A G C T A C G T G C T A A G T C C G T A C T A G T C G A
Reverse Opposite:
A G C T A G T C A C G T A C T G C G A T C G T A C T G A C T A G A C T G G T A C
p-value:1e-9
log p-value:-2.179e+01
Information Content per bp:1.859
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif90.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets47.8 +/- 27.9bp
Average Position of motif in Background52.9 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTACAGA-----
TCNCTTTACAGCGNNNT
 A C G T A C G T A C T G A G T C A G T C A G C T A C G T G C T A A G T C C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTACAGA-----
TCNNTTTACAGCGNNNT
 A C G T A C G T A C T G A G T C A G T C A G C T A C G T G C T A A G T C C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTACAGA-----
TCNNTTTACAGCGNNNT
 A C G T A C G T A C T G A G T C A G T C A G C T A C G T G C T A A G T C C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCCTTACAGA
----CACAGN
 A C T G A G T C A G T C A G C T A C G T G C T A A G T C C G T A C T A G T C G A
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCTTACAGA---
-CCTTTTATAGNC
 A C T G A G T C A G T C A G C T A C G T G C T A A G T C C G T A C T A G T C G A A C G T A C G T A C G T
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

NFIL3/MA0025.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCCTTACAGA-
ANGTTACATAA
 A C T G A G T C A G T C A G C T A C G T G C T A A G T C C G T A C T A G T C G A A C G T
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCCTTACAGA
--TTGACAGC
 A C T G A G T C A G T C A G C T A C G T G C T A A G T C C G T A C T A G T C G A
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------GCCTTACAGA--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G C T A C G T G C T A A G T C C G T A C T A G T C G A A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCCTTACAGA
RCATTCCWGG
 A C T G A G T C A G T C A G C T A C G T G C T A A G T C C G T A C T A G T C G A
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCCTTACAGA-
-VBTGWCAGCB
 A C T G A G T C A G T C A G C T A C G T G C T A A G T C C G T A C T A G T C G A A C G T
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C