Information for 13-AGBATDCACAGAGCAT (Motif 18)

C T G A C T A G A C T G C T G A C G A T C A T G A T G C T G C A A T G C C G T A A C T G C G T A A C T G A G T C C G T A A C G T
Reverse Opposite:
G T C A A C G T C T A G A G T C C G A T A G T C A C G T A T C G A C G T A T C G G A T C C G T A A G C T T A G C A G T C A G C T
p-value:1e-7
log p-value:-1.626e+01
Information Content per bp:1.755
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 12.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:AGBATDCACAGAGCAT
------CACAGN----
 C T G A C T A G A C T G C T G A C G A T C A T G A T G C T G C A A T G C C G T A A C T G C G T A A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.49
Offset:3
Orientation:forward strand
Alignment:AGBATDCACAGAGCAT----
---AATCGCACTGCATTCCG
 C T G A C T A G A C T G C T G A C G A T C A T G A T G C T G C A A T G C C G T A A C T G C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AGBATDCACAGAGCAT
CANAGNNCAAAGTCCA-
 A C G T C T G A C T A G A C T G C T G A C G A T C A T G A T G C T G C A A T G C C G T A A C T G C G T A A C T G A G T C C G T A A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:AGBATDCACAGAGCAT
-WYATGCATWATGCAT
 C T G A C T A G A C T G C T G A C G A T C A T G A T G C T G C A A T G C C G T A A C T G C G T A A C T G A G T C C G T A A C G T
A C G T C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--AGBATDCACAGAGCAT
TGACANARRCCAGRC---
 A C G T A C G T C T G A C T A G A C T G C T G A C G A T C A T G A T G C T G C A A T G C C G T A A C T G C G T A A C T G A G T C C G T A A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.48
Offset:1
Orientation:forward strand
Alignment:AGBATDCACAGAGCAT-
-AAACAGACAAAGGAAT
 C T G A C T A G A C T G C T G A C G A T C A T G A T G C T G C A A T G C C G T A A C T G C G T A A C T G A G T C C G T A A C G T A C G T
A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.47
Offset:6
Orientation:forward strand
Alignment:AGBATDCACAGAGCAT
------CAAAGGTCAG
 C T G A C T A G A C T G C T G A C G A T C A T G A T G C T G C A A T G C C G T A A C T G C G T A A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:AGBATDCACAGAGCAT
----TGCCCAGNHW--
 C T G A C T A G A C T G C T G A C G A T C A T G A T G C T G C A A T G C C G T A A C T G C G T A A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.47
Offset:0
Orientation:forward strand
Alignment:AGBATDCACAGAGCAT
AGAGTCCAAAGTCCA-
 C T G A C T A G A C T G C T G A C G A T C A T G A T G C T G C A A T G C C G T A A C T G C G T A A C T G A G T C C G T A A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.46
Offset:7
Orientation:reverse strand
Alignment:AGBATDCACAGAGCAT
-------ACAAAG---
 C T G A C T A G A C T G C T G A C G A T C A T G A T G C T G C A A T G C C G T A A C T G C G T A A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T