Information for 3-KYKCYRCTRATGWKCT (Motif 3)

A C G T A G C T A C T G A G T C A G T C C T G A A T G C A C G T C T G A C G T A A C G T A C T G C G T A A C T G G T A C A C G T
Reverse Opposite:
C G T A A C T G G T A C C G A T A G T C G T C A A C G T A G C T C G T A A T C G A G C T C T A G A C T G G T A C C T G A G T C A
p-value:1e-10
log p-value:-2.343e+01
Information Content per bp:1.806
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets78.0 +/- 9.5bp
Average Position of motif in Background39.9 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:KYKCYRCTRATGWKCT
------NTAATGAGCT
 A C G T A G C T A C T G A G T C A G T C C T G A A T G C A C G T C T G A C G T A A C G T A C T G C G T A A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0058.1_Hoxb3/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:KYKCYRCTRATGWKCT--
-TNNNACTAATTAGNTCA
 A C G T A G C T A C T G A G T C A G T C C T G A A T G C A C G T C T G A C G T A A C G T A C T G C G T A A C T G G T A C A C G T A C G T A C G T
A C G T G C A T G A T C A G T C G T C A T C G A A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A T G C A C G T A G T C C G T A

PH0097.1_Lhx6_2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:KYKCYRCTRATGWKCT---
--TCCACTAATTAGCGGTT
 A C G T A G C T A C T G A G T C A G T C C T G A A T G C A C G T C T G A C G T A A C G T A C T G C G T A A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T T G A C G A T C T C G A G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G T C C A T G C T A G C G A T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:KYKCYRCTRATGWKCT---
--GACGATAATGAGCTTGC
 A C G T A G C T A C T G A G T C A G T C C T G A A T G C A C G T C T G A C G T A A C G T A C T G C G T A A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PH0032.1_Evx2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:KYKCYRCTRATGWKCT--
-CACCGCTAATTAGCGGT
 A C G T A G C T A C T G A G T C A G T C C T G A A T G C A C G T C T G A C G T A A C G T A C T G C G T A A C T G G T A C A C G T A C G T A C G T
A C G T A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

PH0027.1_Emx2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:KYKCYRCTRATGWKCT--
-NNCCACTAATTAGNNNT
 A C G T A G C T A C T G A G T C A G T C C T G A A T G C A C G T C T G A C G T A A C G T A C T G C G T A A C T G G T A C A C G T A C G T A C G T
A C G T T C A G C A G T A T G C T G A C T C G A A G T C G A C T G T C A G C T A C A G T A C G T C T G A T C A G A G C T A C T G A T C G C G A T

PH0031.1_Evx1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:KYKCYRCTRATGWKCT--
-NNNCACTAATTAGTNNT
 A C G T A G C T A C T G A G T C A G T C C T G A A T G C A C G T C T G A C G T A A C G T A C T G C G T A A C T G G T A C A C G T A C G T A C G T
A C G T A C T G G C A T A T G C T A G C T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T C A G T A G T C C G A T

PH0098.1_Lhx8/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:KYKCYRCTRATGWKCT---
--ACCCCTAATTAGCGGTG
 A C G T A G C T A C T G A G T C A G T C C T G A A T G C A C G T C T G A C G T A A C G T A C T G C G T A A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:KYKCYRCTRATGWKCT---
--AAACATAATGAGGTTGC
 A C G T A G C T A C T G A G T C A G T C C T G A A T G C A C G T C T G A C G T A A C G T A C T G C G T A A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

EVX2/MA0888.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:KYKCYRCTRATGWKCT
-----NNTAATTANN-
 A C G T A G C T A C T G A G T C A G T C C T G A A T G C A C G T C T G A C G T A A C G T A C T G C G T A A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C A C G T