Information for 9-CTGTGGAGAT (Motif 33)

A G T C A C G T A C T G A G C T A C T G A C T G C T G A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G C T G T A C A G T C C T G A A G T C G T C A A C T G
p-value:1e-4
log p-value:-1.085e+01
Information Content per bp:1.915
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif39.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets60.8 +/- 26.3bp
Average Position of motif in Background41.2 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTGTGGAGAT
--GTGGAT--
 A G T C A C G T A C T G A G C T A C T G A C T G C T G A A C T G C G T A A C G T
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGAGAT
GCTGTG-----
 A C G T A G T C A C G T A C T G A G C T A C T G A C T G C T G A A C T G C G T A A C G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGAGAT
GCTGTGGTTT-
 A C G T A G T C A C G T A C T G A G C T A C T G A C T G C T G A A C T G C G T A A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGGAGAT
NNHTGTGGTTWN
 A C G T A C G T A G T C A C G T A C T G A G C T A C T G A C T G C T G A A C T G C G T A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGTGGAGAT
ATGGGGTGAT
 A G T C A C G T A C T G A G C T A C T G A C T G C T G A A C T G C G T A A C G T
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTGTGGAGAT---
AGATGKDGAGATAAG
 A C G T A C G T A G T C A C G T A C T G A G C T A C T G A C T G C T G A A C T G C G T A A C G T A C G T A C G T A C G T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTGTGGAGAT
GTCTGTGGTTT-
 A C G T A C G T A G T C A C G T A C T G A G C T A C T G A C T G C T G A A C T G C G T A A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGTGGAGAT
GTGGGGTGAT
 A G T C A C G T A C T G A G C T A C T G A C T G C T G A A C T G C G T A A C G T
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTGTGGAGAT
---TGGGGA-
 A G T C A C G T A C T G A G C T A C T G A C T G C T G A A C T G C G T A A C G T
A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTGTGGAGAT---
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A C T G A C T G C T G A A C T G C G T A A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G