Information for 6-CAVACGAAAGACCAGC (Motif 6)

A G T C C G T A T A C G C T G A T A G C A T C G C G T A C T G A C G T A C T A G C G T A A G T C A G T C C G T A A C T G A T G C
Reverse Opposite:
A T C G A G T C C G A T A C T G C T A G A C G T A G T C G C A T A G C T A C G T A T G C A T C G A G C T A G T C C G A T C T A G
p-value:1e-9
log p-value:-2.247e+01
Information Content per bp:1.781
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.5 +/- 26.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CAVACGAAAGACCAGC
---AGGAAACAGCTG-
 A G T C C G T A T A C G C T G A T A G C A T C G C G T A C T G A C G T A C T A G C G T A A G T C A G T C C G T A A C T G A T G C
A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAVACGAAAGACCAGC
-AGAGGAA--------
 A G T C C G T A T A C G C T G A T A G C A T C G C G T A C T G A C G T A C T A G C G T A A G T C A G T C C G T A A C T G A T G C
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CAVACGAAAGACCAGC
----GGAAANCCCC--
 A G T C C G T A T A C G C T G A T A G C A T C G C G T A C T G A C G T A C T A G C G T A A G T C A G T C C G T A A C T G A T G C
A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CAVACGAAAGACCAGC
AAATAAGAAAAAAC---
 A C G T A G T C C G T A T A C G C T G A T A G C A T C G C G T A C T G A C G T A C T A G C G T A A G T C A G T C C G T A A C T G A T G C
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:5
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CAVACGAAAGACCAGC
AGAAACGAAAGT-----
 A C G T A G T C C G T A T A C G C T G A T A G C A T C G C G T A C T G A C G T A C T A G C G T A A G T C A G T C C G T A A C T G A T G C
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CAVACGAAAGACCAGC
AGAGTCCAAAGTCCA--
 A C G T A G T C C G T A T A C G C T G A T A G C A T C G C G T A C T G A C G T A C T A G C G T A A G T C A G T C C G T A A C T G A T G C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CAVACGAAAGACCAGC
CANAGNNCAAAGTCCA--
 A C G T A C G T A G T C C G T A T A C G C T G A T A G C A T C G C G T A C T G A C G T A C T A G C G T A A G T C A G T C C G T A A C T G A T G C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CAVACGAAAGACCAGC
-AATGGAAAAT-----
 A G T C C G T A T A C G C T G A T A G C A T C G C G T A C T G A C G T A C T A G C G T A A G T C A G T C C G T A A C T G A T G C
A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CAVACGAAAGACCAGC
----GGAAATTCCC--
 A G T C C G T A T A C G C T G A T A G C A T C G C G T A C T G A C G T A C T A G C G T A A G T C A G T C C G T A A C T G A T G C
A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CAVACGAAAGACCAGC
----GGAAATCCCC--
 A G T C C G T A T A C G C T G A T A G C A T C G C G T A C T G A C G T A C T A G C G T A A G T C A G T C C G T A A C T G A T G C
A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T