Information for 15-GAGACCACAACCACCC (Motif 20)

A C T G C T G A A T C G G T C A A G T C A G T C C G T A A G T C C G T A T C G A G T A C A G T C C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G C T A G A C G T A C T G A C T G A G C T A C G T A C T G A C G T A C T G A C T G A C G T A T G C A G C T A G T C
p-value:1e-7
log p-value:-1.626e+01
Information Content per bp:1.916
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.5 +/- 16.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAGACCACAACCACCC
NWAACCACADNN----
 A C T G C T G A A T C G G T C A A G T C A G T C C G T A A G T C C G T A T C G A G T A C A G T C C G T A A G T C A G T C A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAGACCACAACCACCC
-AAACCACAGAN----
 A C T G C T G A A T C G G T C A A G T C A G T C C G T A A G T C C G T A T C G A G T A C A G T C C G T A A G T C A G T C A G T C
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGACCACAACCACCC
-AAACCACANN-----
 A C T G C T G A A T C G G T C A A G T C A G T C C G T A A G T C C G T A T C G A G T A C A G T C C G T A A G T C A G T C A G T C
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAGACCACAACCACCC
-AAACCACAGC-----
 A C T G C T G A A T C G G T C A A G T C A G T C C G T A A G T C C G T A T C G A G T A C A G T C C G T A A G T C A G T C A G T C
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGACCACAACCACCC
NAAACCACAG------
 A C T G C T G A A T C G G T C A A G T C A G T C C G T A A G T C C G T A T C G A G T A C A G T C C G T A A G T C A G T C A G T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAGACCACAACCACCC
--GGCCACACCCAN--
 A C T G C T G A A T C G G T C A A G T C A G T C C G T A A G T C C G T A T C G A G T A C A G T C C G T A A G T C A G T C A G T C
A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GAGACCACAACCACCC-------
---CCCCAAACCACCCCCCCCCA
 A C T G C T G A A T C G G T C A A G T C A G T C C G T A A G T C C G T A T C G A G T A C A G T C C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GAGACCACAACCACCC
---GCCACACCCA---
 A C T G C T G A A T C G G T C A A G T C A G T C C G T A A G T C C G T A T C G A G T A C A G T C C G T A A G T C A G T C A G T C
A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAGACCACAACCACCC
--GGCCACACCCA---
 A C T G C T G A A T C G G T C A A G T C A G T C C G T A A G T C C G T A T C G A G T A C A G T C C G T A A G T C A G T C A G T C
A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAGACCACAACCACCC
-AAACCGCAAA-----
 A C T G C T G A A T C G G T C A A G T C A G T C C G T A A G T C C G T A T C G A G T A C A G T C C G T A A G T C A G T C A G T C
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T A C G T