Homer de novo Motif Results (hs_Embryonic_HUES64_normal_SMAD4_SRX702092_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 938
Total background sequences = 46542
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G A T C A G T C T C G A A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G G T A C T C A G 1e-22-5.154e+014.58%0.63%23.6bp (28.7bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.916)
More Information | Similar Motifs Found		motif file (matrix)
2 T C A G A T G C G A C T C A T G A T G C G T A C A T C G A T G C A G T C C A T G 1e-18-4.174e+0161.41%47.05%24.8bp (35.0bp)PB0164.1_Smad3_2/Jaspar(0.696)
More Information | Similar Motifs Found		motif file (matrix)
3 A C G T A C T G A C T G A T C G A T C G A C T G T G C A C T A G A T C G T A C G T A C G T A C G A T G C T C A G A T C G A T G C 1e-16-3.871e+016.18%1.61%21.5bp (30.6bp)SP1/MA0079.3/Jaspar(0.804)
More Information | Similar Motifs Found		motif file (matrix)
4 C T G A A T G C C G T A A C G T A G C T A G T C A G T C G C A T A C T G C T A G A C T G T A C G A C G T C T A G T A C G A T G C 1e-13-3.004e+010.64%0.00%18.3bp (18.1bp)TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer(0.811)
More Information | Similar Motifs Found		motif file (matrix)
5 A T G C G T C A A C G T G T A C A G T C T C G A A C T G A C T G A G T C A T C G A T C G C T G A A C T G C G T A A C T G C G T A 1e-13-3.004e+010.64%0.00%23.3bp (14.2bp)PB0140.1_Irf6_2/Jaspar(0.540)
More Information | Similar Motifs Found		motif file (matrix)
6 T C A G A T C G G T C A A T G C A G C T A G T C T G C A G T A C T C A G A C T G G T C A T A C G A G T C A G T C C T G A A C T G 1e-12-2.908e+010.85%0.01%22.9bp (21.6bp)Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer(0.603)
More Information | Similar Motifs Found		motif file (matrix)
7 * A G C T C A G T C G T A A G C T C G T A C G A T C T G A C T A G C T G A A T G C T G C A C T A G G T A C 1e-11-2.747e+011.39%0.08%31.7bp (25.2bp)TBP/MA0108.2/Jaspar(0.672)
More Information | Similar Motifs Found		motif file (matrix)
8 * T A G C C T A G T A G C A T G C A G T C G C A T T C G A C A G T T C G A T C G A 1e-11-2.587e+012.99%0.58%29.6bp (37.8bp)HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer(0.643)
More Information | Similar Motifs Found		motif file (matrix)
9 * C G T A C T A G C G T A A G T C C T A G G T A C G C T A C T A G G C T A G T A C 1e-11-2.565e+013.09%0.63%23.9bp (30.2bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.628)
More Information | Similar Motifs Found		motif file (matrix)
10 * A C T G C T G A A C T G G C T A A C G T A C G T A C G T A C T G A C G T A C G T 1e-10-2.448e+010.96%0.03%31.0bp (33.6bp)Gfi1/MA0038.1/Jaspar(0.718)
More Information | Similar Motifs Found		motif file (matrix)
11 * A G T C C A T G A T G C A G T C A G T C G A T C A G C T G A C T G C A T C G A T T C G A A C T G T A G C T A C G A C G T T A G C 1e-10-2.411e+011.71%0.18%26.4bp (34.6bp)KLF13/MA0657.1/Jaspar(0.669)
More Information | Similar Motifs Found		motif file (matrix)
12 * A G T C A G C T C G A T A G C T A C G T A C G T A C G T C G T A C G T A A C G T 1e-10-2.370e+011.39%0.11%26.7bp (33.9bp)PB0129.1_Glis2_2/Jaspar(0.754)
More Information | Similar Motifs Found		motif file (matrix)
13 * G T C A A C G T C G T A A C G T A C T G A G T C C G T A A C G T G C A T C A G T 1e-10-2.332e+011.49%0.13%23.7bp (28.0bp)POU2F2/MA0507.1/Jaspar(0.904)
More Information | Similar Motifs Found		motif file (matrix)
14 * A C T G C T A G A G T C A C G T G T A C A G C T A C G T G A C T C G T A C G T A 1e-9-2.088e+011.28%0.11%29.0bp (36.4bp)POU6F2/MA0793.1/Jaspar(0.672)
More Information | Similar Motifs Found		motif file (matrix)
15 * A T G C A C T G A T C G A T G C C G T A A C T G T G C A A T G C A C T G A C T G A G T C A C G T A G T C 1e-8-2.051e+011.39%0.14%24.2bp (29.8bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.627)
More Information | Similar Motifs Found		motif file (matrix)
16 * A C T G A C T G A G T C A C T G A C T G A C T G A C T G A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T C G T A 1e-8-1.882e+010.43%0.00%12.0bp (0.0bp)PB0039.1_Klf7_1/Jaspar(0.630)
More Information | Similar Motifs Found		motif file (matrix)
17 * T A G C A C T G G A T C A T G C G T C A G A C T A C G T A C G T A G C T A C G T 1e-8-1.867e+015.76%2.40%28.2bp (37.0bp)YY2/MA0748.1/Jaspar(0.816)
More Information | Similar Motifs Found		motif file (matrix)
18 * A T G C C G T A A C T G A G T C A T C G G T C A A G T C C G A T A T C G C T G A 1e-7-1.812e+011.81%0.31%24.6bp (29.8bp)POL010.1_DCE_S_III/Jaspar(0.661)
More Information | Similar Motifs Found		motif file (matrix)
19 * A C T G C G T A T G A C C G A T A C G T A C T G A C G T C G T A A C T G A C G T A G T C A C G T A C G T 1e-6-1.606e+010.43%0.00%37.0bp (0.0bp)GFY(?)/Promoter/Homer(0.712)
More Information | Similar Motifs Found		motif file (matrix)
20 * A T G C G T C A A T G C C T A G C T A G A G C T C G A T G A T C A G T C A C G T 1e-6-1.453e+014.16%1.69%28.0bp (32.3bp)SPIB/MA0081.1/Jaspar(0.622)
More Information | Similar Motifs Found		motif file (matrix)