Information for 10-GGCTCTTTAA (Motif 14)

A C T G C T A G A G T C A C G T G T A C A G C T A C G T G A C T C G T A C G T A
Reverse Opposite:
A C G T A C G T C T G A C G T A C T G A A C T G G T C A C T A G G A T C G T A C
p-value:1e-9
log p-value:-2.088e+01
Information Content per bp:1.849
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif50.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets42.8 +/- 29.0bp
Average Position of motif in Background42.1 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGCTCTTTAA
AGCTCATTAT
 A C T G C T A G A G T C A C G T G T A C A G C T A C G T G A C T C G T A C G T A
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGCTCTTTAA--
-GCTCGTAAAAA
 A C T G C T A G A G T C A C G T G T A C A G C T A C G T G A C T C G T A C G T A A C G T A C G T
A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGCTCTTTAA----
NNNACCTCATTATCNTN
 A C G T A C G T A C G T A C T G C T A G A G T C A C G T G T A C A G C T A C G T G A C T C G T A C G T A A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGCTCTTTAA--
AGGTCTCTAACC
 A C T G C T A G A G T C A C G T G T A C A G C T A C G T G A C T C G T A C G T A A C G T A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCTCTTTAA----
AAAGCTCGTAAAATTT
 A C G T A C G T A C T G C T A G A G T C A C G T G T A C A G C T A C G T G A C T C G T A C G T A A C G T A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GGCTCTTTAA-
-----TTTAAT
 A C T G C T A G A G T C A C G T G T A C A G C T A C G T G A C T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGCTCTTTAA---
-GGTCGTAAAATT
 A C T G C T A G A G T C A C G T G T A C A G C T A C G T G A C T C G T A C G T A A C G T A C G T A C G T
A C G T C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGCTCTTTAA----
AAACCTCGTAAAATTT
 A C G T A C G T A C T G C T A G A G T C A C G T G T A C A G C T A C G T G A C T C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PH0073.1_Hoxc9/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGCTCTTTAA----
GGAGGTCATTAATTAT
 A C G T A C G T A C T G C T A G A G T C A C G T G T A C A G C T A C G T G A C T C G T A C G T A A C G T A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGCTCTTTAA
--GTAATTAA
 A C T G C T A G A G T C A C G T G T A C A G C T A C G T G A C T C G T A C G T A
A C G T A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A