Information for 1-CCACBAGAKGGCG (Motif 1)

G A T C A G T C T C G A A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G G T A C T C A G
Reverse Opposite:
A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T T C A G T C A G A G C T A C T G C T A G
p-value:1e-22
log p-value:-5.154e+01
Information Content per bp:1.759
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif4.58%
Number of Background Sequences with motif294.0
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets54.7 +/- 23.6bp
Average Position of motif in Background50.3 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-CCACBAGAKGGCG------
GCCASCAGGGGGCGCYVNNG
 A C G T G A T C A G T C T C G A A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G G T A C T C A G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---CCACBAGAKGGCG----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T G A T C A G T C T C G A A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G G T A C T C A G A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---CCACBAGAKGGCG---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T G A T C A G T C T C G A A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G G T A C T C A G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCACBAGAKGGCG
--AACAGATGGC-
 G A T C A G T C T C G A A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G G T A C T C A G
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCACBAGAKGGCG-----
-NNNAAGGGGGCGGGNNN
 G A T C A G T C T C G A A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G G T A C T C A G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCACBAGAKGGCG--
---CAAGATGGCGGC
 G A T C A G T C T C G A A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G G T A C T C A G A C G T A C G T
A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCACBAGAKGGCG--
---CAAGATGGCGGC
 G A T C A G T C T C G A A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G G T A C T C A G A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCACBAGAKGGCG
--AACAGATGGT-
 G A T C A G T C T C G A A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G G T A C T C A G
A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCACBAGAKGGCG--
-ANTGCGGGGGCGGN
 G A T C A G T C T C G A A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G G T A C T C A G A C G T A C G T
A C G T G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCACBAGAKGGCG
VNAVCAGCTGGC-
 G A T C A G T C T C G A A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G G T A C T C A G
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T