Information for 12-CAGCGACTGA (Motif 18)

A T G C C G T A A C T G A G T C A T C G G T C A A G T C C G A T A T C G C T G A
Reverse Opposite:
A G C T A T G C C G T A A C T G A C G T A T G C A C T G A G T C A C G T A T C G
p-value:1e-7
log p-value:-1.812e+01
Information Content per bp:1.853
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif145.0
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets57.6 +/- 24.6bp
Average Position of motif in Background50.8 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAGCGACTGA
CAGCC-----
 A T G C C G T A A C T G A G T C A T C G G T C A A G T C C G A T A T C G C T G A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGCGACTGA
CACAGN------
 A C G T A C G T A T G C C G T A A C T G A G T C A T C G G T C A A G T C C G A T A T C G C T G A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0179.1_Sp100_2/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCGACTGA
NNTTTANNCGACGNA
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A T C G G T C A A G T C C G A T A T C G C T G A
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------CAGCGACTGA
NNNNTGCCAGTGATTG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A T C G G T C A A G T C C G A T A T C G C T G A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:5
Score:0.55
Offset:-8
Orientation:reverse strand
Alignment:--------CAGCGACTGA
TCNNTTTACAGCGNNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A T C G G T C A A G T C C G A T A T C G C T G A
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:6
Score:0.55
Offset:-8
Orientation:reverse strand
Alignment:--------CAGCGACTGA
TCNNTTTACAGCGNNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A T C G G T C A A G T C C G A T A T C G C T G A
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.55
Offset:-8
Orientation:reverse strand
Alignment:--------CAGCGACTGA
TCNCTTTACAGCGNNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A T C G G T C A A G T C C G A T A T C G C T G A
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAGCGACTGA
NCAGCTGCTG-
 A C G T A T G C C G T A A C T G A G T C A T C G G T C A A G T C C G A T A T C G C T G A
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAGCGACTGA
AGCAGCTGCTNN
 A C G T A C G T A T G C C G T A A C T G A G T C A T C G G T C A A G T C C G A T A T C G C T G A
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAGCGACTGA----
TNNTGCTACTGTNNNN
 A C G T A C G T A T G C C G T A A C T G A G T C A T C G G T C A A G T C C G A T A T C G C T G A A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T