Information for 5-GAGATTTGTT (Motif 10)

A C T G C T G A A C T G G C T A A C G T A C G T A C G T A C T G A C G T A C G T
Reverse Opposite:
T C G A C G T A A G T C T C G A C G T A C G T A C G A T A G T C A G C T A G T C
p-value:1e-10
log p-value:-2.448e+01
Information Content per bp:1.864
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif14.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.2 +/- 31.0bp
Average Position of motif in Background54.4 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GAGATTTGTT
CNGTGATTTN--
 A C G T A C G T A C T G C T G A A C T G G C T A A C G T A C G T A C G T A C T G A C G T A C G T
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GAGATTTGTT
TGCTGTGATTT---
 A C G T A C G T A C G T A C G T A C T G C T G A A C T G G C T A A C G T A C G T A C G T A C T G A C G T A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GAGATTTGTT
----ATTGTT
 A C T G C T G A A C T G G C T A A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAGATTTGTT--
--CCATTGTTNY
 A C T G C T G A A C T G G C T A A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GAGATTTGTT
GCAGTGATTT---
 A C G T A C G T A C G T A C T G C T G A A C T G G C T A A C G T A C G T A C G T A C T G A C G T A C G T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAGATTTGTT--
--CCTTTGTTTT
 A C T G C T G A A C T G G C T A A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GAGATTTGTT---
----ATTGTTTAN
 A C T G C T G A A C T G G C T A A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGATTTGTT-----
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C T G C T G A A C T G G C T A A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0165.1_Sox11_2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGATTTGTT-----
-AAAATTGTTATGAA
 A C T G C T G A A C T G G C T A A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Hoxc9/MA0485.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAGATTTGTT---
NTGATTTATGGCC
 A C T G C T G A A C T G G C T A A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C