Information for 14-CACGRTWCCK (Motif 20)

A T G C G T C A A T G C C T A G C T A G A G C T C G A T G A T C A G T C A C G T
Reverse Opposite:
G T C A A C T G C T A G C G T A C T G A A G T C A G T C A T C G C A G T A T C G
p-value:1e-6
log p-value:-1.453e+01
Information Content per bp:1.711
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.16%
Number of Background Sequences with motif786.6
Percentage of Background Sequences with motif1.69%
Average Position of motif in Targets50.4 +/- 28.0bp
Average Position of motif in Background51.7 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CACGRTWCCK--
-----TTCCTCT
 A T G C G T C A A T G C C T A G C T A G A G C T C G A T G A T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CACGRTWCCK--
--NRYTTCCGGH
 A T G C G T C A A T G C C T A G C T A G A G C T C G A T G A T C A G T C A C G T A C G T A C G T
A C G T A C G T A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CACGRTWCCK--
--HACTTCCGGY
 A T G C G T C A A T G C C T A G C T A G A G C T C G A T G A T C A G T C A C G T A C G T A C G T
A C G T A C G T G A T C T C G A A G T C C G A T C G A T A G T C A T G C A C T G A T C G G A C T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CACGRTWCCK--
--NRYTTCCGGY
 A T G C G T C A A T G C C T A G C T A G A G C T C G A T G A T C A G T C A C G T A C G T A C G T
A C G T A C G T G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T

PB0127.1_Gata6_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CACGRTWCCK-----
GCGGCGATATCGCAGCG
 A C G T A C G T A T G C G T C A A T G C C T A G C T A G A G C T C G A T G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CACGRTWCCK---
-NNAYTTCCTGHN
 A T G C G T C A A T G C C T A G C T A G A G C T C G A T G A T C A G T C A C G T A C G T A C G T A C G T
A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CACGRTWCCK--
--RCATTCCWGG
 A T G C G T C A A T G C C T A G C T A G A G C T C G A T G A T C A G T C A C G T A C G T A C G T
A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

PB0162.1_Sfpi1_2/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CACGRTWCCK-------
---GGTTCCNNAATTTG
 A T G C G T C A A T G C C T A G C T A G A G C T C G A T G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CACGRTWCCK---
---ACTTCCTGBT
 A T G C G T C A A T G C C T A G C T A G A G C T C G A T G A T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CACGRTWCCK--
--CACTTCCTGT
 A T G C G T C A A T G C C T A G C T A G A G C T C G A T G A T C A G T C A C G T A C G T A C G T
A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T