Information for 4-CATCCVGGCGGAGAGA (Motif 5)

A T G C G T C A A C G T G T A C A G T C T C G A A C T G A C T G A G T C A T C G A T C G C T G A A C T G C G T A A C T G C G T A
Reverse Opposite:
C G A T A G T C A C G T A G T C A G C T A T G C A T G C A C T G A G T C A G T C A C G T A C T G A C T G C G T A A C G T A T C G
p-value:1e-13
log p-value:-3.004e+01
Information Content per bp:1.833
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.7 +/- 23.3bp
Average Position of motif in Background20.0 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CATCCVGGCGGAGAGA---
----NNNACCGAGAGTNNN
 A T G C G T C A A C G T G T A C A G T C T C G A A C T G A C T G A G T C A T C G A T C G C T G A A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CATCCVGGCGGAGAGA-
NAGANTGGCGGGGNGNA
 A T G C G T C A A C G T G T A C A G T C T C G A A C T G A C T G A G T C A T C G A T C G C T G A A C T G C G T A A C T G C G T A A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CATCCVGGCGGAGAGA
----CWGGCGGGAA--
 A T G C G T C A A C G T G T A C A G T C T C G A A C T G A C T G A G T C A T C G A T C G C T G A A C T G C G T A A C T G C G T A
A C G T A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CATCCVGGCGGAGAGA
TACATCCGGGT-------
 A C G T A C G T A T G C G T C A A C G T G T A C A G T C T C G A A C T G A C T G A G T C A T C G A T C G C T G A A C T G C G T A A C T G C G T A
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CATCCVGGCGGAGAGA-
-NATNGGGNGGGGANAN
 A T G C G T C A A C G T G T A C A G T C T C G A A C T G A C T G A G T C A T C G A T C G C T G A A C T G C G T A A C T G C G T A A C G T
A C G T C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CATCCVGGCGGAGAGA
TATGCGGGTA------
 A T G C G T C A A C G T G T A C A G T C T C G A A C T G A C T G A G T C A T C G A T C G C T G A A C T G C G T A A C T G C G T A
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CATCCVGGCGGAGAGA
--TNNGGGCAG-----
 A T G C G T C A A C G T G T A C A G T C T C G A A C T G A C T G A G T C A T C G A T C G C T G A A C T G C G T A A C T G C G T A
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CATCCVGGCGGAGAGA
CATGCGGGTAC-----
 A T G C G T C A A C G T G T A C A G T C T C G A A C T G A C T G A G T C A T C G A T C G C T G A A C T G C G T A A C T G C G T A
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CATCCVGGCGGAGAGA
NNNNATGCGGGTNNNN---
 A C G T A C G T A C G T A T G C G T C A A C G T G T A C A G T C T C G A A C T G A C T G A G T C A T C G A T C G C T G A A C T G C G T A A C T G C G T A
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CATCCVGGCGGAGAGA
-----GGGCGGGAAGG
 A T G C G T C A A C G T G T A C A G T C T C G A A C T G A C T G A G T C A T C G A T C G C T G A A C T G C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G