Homer de novo Motif Results (hs_Embryonic_HUES64_normal_HNF4A_SRX702028_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 796
Total background sequences = 13398
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G C T C T A G C T A G G T C A A G T C A G C T A G C T A G C T A C T G T G C A G A T C G T A C A G T C 1e-219-5.048e+0228.14%1.34%24.1bp (29.4bp)Hnf4a/MA0114.3/Jaspar(0.966)
More Information | Similar Motifs Found		motif file (matrix)
2 A T G C G C A T A G T C G C T A C T G A C T A G C T A G C A T G C G A T A G T C C G T A G T C A T C G A 1e-21-4.868e+011.38%0.00%21.5bp (0.0bp)NR2F1/MA0017.2/Jaspar(0.730)
More Information | Similar Motifs Found		motif file (matrix)
3 A G T C C G T A T C A G C G T A A G T C A C G T A C T G A G C T A G T C A G T C G C A T A C G T T G C A 1e-14-3.328e+011.01%0.01%14.5bp (0.0bp)PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer(0.702)
More Information | Similar Motifs Found		motif file (matrix)
4 A C G T C T A G A C T G A T C G A C G T G T A C C G A T A C T G C G T A A C T G C T G A A G T C A G C T 1e-14-3.328e+011.01%0.01%30.1bp (29.7bp)SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar(0.567)
More Information | Similar Motifs Found		motif file (matrix)
5 A C T G T C A G C A G T A T C G C T G A A C T G T G A C A C T G A T G C A G T C G T A C A G T C C G T A A T C G A C T G G A T C 1e-14-3.328e+011.01%0.01%21.5bp (0.0bp)TFAP2A/MA0003.3/Jaspar(0.696)
More Information | Similar Motifs Found		motif file (matrix)
6 G T A C C G A T G T A C G T C A C A T G A G T C A G T C C T G A A C T G A G T C A G T C C T A G A G T C 1e-14-3.278e+011.51%0.05%24.9bp (22.3bp)Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer(0.663)
More Information | Similar Motifs Found		motif file (matrix)
7 G A C T T C G A T A C G C G T A A C T G A C T G A T C G A T G C C G T A C T G A C T G A A C T G A C T G 1e-13-3.160e+012.01%0.13%26.8bp (22.2bp)RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer(0.798)
More Information | Similar Motifs Found		motif file (matrix)
8 A G T C G T A C G T A C A T G C T C G A C G A T T A G C G T A C G C T A C T A G T G A C A G T C A G C T A C T G A C T G A G T C 1e-12-2.837e+010.88%0.01%19.1bp (0.0bp)Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer(0.551)
More Information | Similar Motifs Found		motif file (matrix)
9 A C T G A T C G A C G T A C T G G T C A T A C G G C T A C G T A C G T A A G T C 1e-12-2.807e+011.51%0.07%31.1bp (18.2bp)SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar(0.725)
More Information | Similar Motifs Found		motif file (matrix)
10 C G T A T A C G A C G T A T G C A T G C G C T A A G C T A G T C G A T C A T C G 1e-12-2.797e+012.76%0.37%25.1bp (26.7bp)ETV5/MA0765.1/Jaspar(0.681)
More Information | Similar Motifs Found		motif file (matrix)
11 A C G T A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A A C T G A T C G A C T G 1e-12-2.779e+011.01%0.02%27.1bp (6.1bp)ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer(0.691)
More Information | Similar Motifs Found		motif file (matrix)
12 C T A G G T A C A C T G A C T G C T G A G T C A A T C G A T G C A T C G A C T G A C T G G T A C A C T G 1e-12-2.779e+011.01%0.02%22.0bp (15.8bp)ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer(0.651)
More Information | Similar Motifs Found		motif file (matrix)
13 * C T A G C T G A A T C G A C G T A C T G A T C G C T G A C T G A G T C A C G T A A C G T C T G A A C T G 1e-11-2.689e+011.76%0.13%23.7bp (27.5bp)NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer(0.762)
More Information | Similar Motifs Found		motif file (matrix)
14 * T C G A A C T G C A T G A T C G C T A G A T G C C G T A A T C G G T A C G T A C C A G T A C T G A T C G A G T C C G A T C T A G 1e-10-2.460e+011.01%0.03%25.0bp (28.8bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.654)
More Information | Similar Motifs Found		motif file (matrix)
15 * A T G C A C G T A G T C A G C T G T A C A C G T A G T C A G T C G T C A A G T C A G T C A C G T A G T C 1e-10-2.359e+010.75%0.01%23.9bp (7.4bp)ZNF354C/MA0130.1/Jaspar(0.639)
More Information | Similar Motifs Found		motif file (matrix)
16 * G T C A G T C A C A T G A G T C C G T A A T C G A T G C A T G C T C A G A G T C A G C T A T C G A T G C 1e-10-2.357e+010.88%0.02%22.3bp (16.0bp)MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer(0.665)
More Information | Similar Motifs Found		motif file (matrix)
17 * A G C T A C G T A C G T A G T C A C G T A G C T A G T C A G C T C T G A A C T G A T C G A G T C C G A T 1e-10-2.357e+010.88%0.02%23.0bp (13.6bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.608)
More Information | Similar Motifs Found		motif file (matrix)
18 * C T A G T A C G C G A T C T A G G C T A A T G C G T C A T C A G C T A G A C T G T C A G C T G A A T C G C T G A C T A G C T G A 1e-10-2.334e+013.14%0.61%21.2bp (22.2bp)PB0128.1_Gcm1_2/Jaspar(0.573)
More Information | Similar Motifs Found		motif file (matrix)
19 * C G T A A C G T A C T G C G T A A C T G A T C G C G T A C G T A A C T G A G T C 1e-9-2.235e+011.01%0.03%28.5bp (19.7bp)ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer(0.775)
More Information | Similar Motifs Found		motif file (matrix)
20 * A G T C A C G T A C G T T C G A A C G T A G T C G C T A C T A G A C G T A C T G 1e-9-2.227e+012.64%0.45%25.7bp (36.9bp)PB0022.1_Gata5_1/Jaspar(0.917)
More Information | Similar Motifs Found		motif file (matrix)
21 * A C T G A T G C C G T A A C T G A T C G T A C G A C G T A C T G A C G T A C T G A C G T A T C G A T C G 1e-8-2.061e+011.01%0.04%27.4bp (19.0bp)KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer(0.667)
More Information | Similar Motifs Found		motif file (matrix)
22 * A T C G C G T A A G T C A G T C A C T G A G T C A C T G A C T G A G C T A C T G 1e-8-1.997e+011.13%0.06%31.0bp (15.2bp)HINFP/MA0131.2/Jaspar(0.601)
More Information | Similar Motifs Found		motif file (matrix)
23 * G T C A A G C T A T C G A C G T A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C T G A C T G C T A G A C T G G T C A 1e-8-1.948e+010.75%0.02%19.4bp (8.4bp)Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer(0.712)
More Information | Similar Motifs Found		motif file (matrix)
24 * C G T A A C G T C A T G A C G T T A C G C T G A A C T G A T G C A C G T A C T G 1e-8-1.899e+011.38%0.12%25.9bp (25.1bp)Myb/MA0100.2/Jaspar(0.621)
More Information | Similar Motifs Found		motif file (matrix)
25 * C G A T G A T C A C T G A C T G C T G A C G T A A C G T A C G T C G T A C G T A 1e-8-1.897e+010.63%0.00%23.9bp (0.0bp)PH0130.1_Otx2/Jaspar(0.775)
More Information | Similar Motifs Found		motif file (matrix)
26 * A T G C A G T C C G T A A T C G A G T C A T C G A C T G A C G T A C T G A G T C A T G C A G T C G T A C G T C A A C T G A G T C 1e-8-1.897e+010.63%0.01%21.4bp (18.1bp)PB0133.1_Hic1_2/Jaspar(0.578)
More Information | Similar Motifs Found		motif file (matrix)
27 * G T C A C T G A A C T G T C G A A C G T A G T C C G T A A C T G A G T C A G T C A G T C A G T C G C T A 1e-8-1.882e+010.88%0.03%24.8bp (18.2bp)POL003.1_GC-box/Jaspar(0.643)
More Information | Similar Motifs Found		motif file (matrix)
28 * A G T C A C T G A G T C A T C G A T G C A C T G C T A G C G T A A C T G A G T C T G A C G T A C G A C T 1e-7-1.731e+010.88%0.04%17.2bp (20.3bp)POL013.1_MED-1/Jaspar(0.728)
More Information | Similar Motifs Found		motif file (matrix)
29 * C G T A C G T A C G T A G T A C C G T A C G T A A C G T A C T G A G T C A C T G 1e-7-1.710e+010.75%0.03%19.4bp (24.0bp)Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer(0.822)
More Information | Similar Motifs Found		motif file (matrix)
30 * A G C T C T A G A G T C A G T C C G T A A T C G T A C G A T G C C G T A C T A G 1e-7-1.676e+011.63%0.23%28.1bp (26.1bp)Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer(0.587)
More Information | Similar Motifs Found		motif file (matrix)
31 * A T C G A C G T C T A G A T C G C G T A A T G C C G T A A C T G A G T C A C G T 1e-7-1.613e+012.64%0.64%27.3bp (26.8bp)PH0170.1_Tgif2/Jaspar(0.675)
More Information | Similar Motifs Found		motif file (matrix)
32 * A G T C G T A C C G A T A C T G A T C G T C G A C T A G A T G C G A C T T G C A C G T A A C T G A C T G 1e-6-1.547e+011.51%0.21%26.8bp (27.2bp)PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer(0.608)
More Information | Similar Motifs Found		motif file (matrix)
33 * C G T A C T G A A C T G C A G T A G T C A G T C A G C T A G T C A C G T A G T C A G T C A G T C A G C T 1e-6-1.533e+011.01%0.08%28.9bp (18.4bp)KLF5/MA0599.1/Jaspar(0.746)
More Information | Similar Motifs Found		motif file (matrix)
34 * T G C A A T G C T A G C C G T A A C G T A G T C A G T C G C A T A C T G T G C A A G T C A G T C G A C T 1e-6-1.462e+011.01%0.08%25.6bp (27.9bp)MF0004.1_Nuclear_Receptor_class/Jaspar(0.715)
More Information | Similar Motifs Found		motif file (matrix)
35 * C G T A A C G T A C T G A G T C A C G T A C T G C G T A A G T C A C G T A G T C 1e-6-1.453e+010.50%0.01%23.5bp (4.8bp)MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer(0.890)
More Information | Similar Motifs Found		motif file (matrix)
36 * A T C G T A G C A T C G C G A T C T A G A C G T A C G T A G T C A C G T G T C A A T G C G T C A C G A T 1e-6-1.413e+010.75%0.04%20.3bp (20.4bp)PB0090.1_Zbtb12_1/Jaspar(0.699)
More Information | Similar Motifs Found		motif file (matrix)