Information for 7-YAGAGGGCAAAGG (Motif 7)

G A C T T C G A T A C G C G T A A C T G A C T G A T C G A T G C C G T A C T G A C T G A A C T G A C T G
Reverse Opposite:
A G T C A G T C A G C T A G C T C G A T A T C G T A G C A G T C A G T C C G A T A G T C A G C T C T G A
p-value:1e-13
log p-value:-3.160e+01
Information Content per bp:1.797
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif17.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets55.2 +/- 26.8bp
Average Position of motif in Background48.4 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.80
Offset:2
Orientation:forward strand
Alignment:YAGAGGGCAAAGG---
--TAGGGCAAAGGTCA
 G A C T T C G A T A C G C G T A A C T G A C T G A T C G A T G C C G T A C T G A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

NR2C2/MA0504.1/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:forward strand
Alignment:YAGAGGGCAAAGG---
-AGGGGTCAGAGGTCA
 G A C T T C G A T A C G C G T A A C T G A C T G A T C G A T G C C G T A C T G A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:YAGAGGGCAAAGG---
-GTAGGGCAAAGGTCA
 G A C T T C G A T A C G C G T A A C T G A C T G A T C G A T G C C G T A C T G A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:4
Score:0.74
Offset:2
Orientation:forward strand
Alignment:YAGAGGGCAAAGG---
--GAGGTCAAAGGTCA
 G A C T T C G A T A C G C G T A A C T G A C T G A T C G A T G C C G T A C T G A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:YAGAGGGCAAAGG---
--TGGGGCAAAGGTCA
 G A C T T C G A T A C G C G T A A C T G A C T G A T C G A T G C C G T A C T G A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:YAGAGGGCAAAGG---
--GAGGTCAAAGGTCA
 G A C T T C G A T A C G C G T A A C T G A C T G A T C G A T G C C G T A C T G A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:YAGAGGGCAAAGG---
-AGAGTCCAAAGTCCA
 G A C T T C G A T A C G C G T A A C T G A C T G A T C G A T G C C G T A C T G A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:YAGAGGGCAAAGG
CAAAGGTCAAGGG
 G A C T T C G A T A C G C G T A A C T G A C T G A T C G A T G C C G T A C T G A C T G A A C T G A C T G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:forward strand
Alignment:YAGAGGGCAAAGG-----
-AAAGGTCAAAGGTCAAC
 G A C T T C G A T A C G C G T A A C T G A C T G A T C G A T G C C G T A C T G A C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

Rxra/MA0512.2/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:forward strand
Alignment:YAGAGGGCAAAGG---
--GGGGTCAAAGGTCA
 G A C T T C G A T A C G C G T A A C T G A C T G A T C G A T G C C G T A C T G A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A