Information for 1-TGGACTTTGACCC (Motif 1)

A G C T C T A G C T A G G T C A A G T C A G C T A G C T A G C T A C T G T G C A G A T C G T A C A G T C
Reverse Opposite:
T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A A C T G A C G T A G T C G A T C C T G A
p-value:1e-219
log p-value:-5.048e+02
Information Content per bp:1.742
Number of Target Sequences with motif224.0
Percentage of Target Sequences with motif28.14%
Number of Background Sequences with motif179.1
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets52.7 +/- 24.1bp
Average Position of motif in Background52.4 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--TGGACTTTGACCC-
ATTGGACTTTGACCCC
 A C G T A C G T A G C T C T A G C T A G G T C A A G T C A G C T A G C T A G C T A C T G T G C A G A T C G T A C A G T C A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGACCC---
TGGACTTTGNNCTNTG
 A G C T C T A G C T A G G T C A A G T C A G C T A G C T A G C T A C T G T G C A G A T C G T A C A G T C A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGACCC--
TGGACTTTGNNCTCN
 A G C T C T A G C T A G G T C A A G T C A G C T A G C T A G C T A C T G T G C A G A T C G T A C A G T C A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----TGGACTTTGACCC
NNATTGGACTTTNGNN-
 A C G T A C G T A C G T A C G T A G C T C T A G C T A G G T C A A G T C A G C T A G C T A G C T A C T G T G C A G A T C G T A C A G T C
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T

RXRG/MA0856.1/Jaspar

Match Rank:5
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGACCC-
TGACCTTTGACCCC
 A G C T C T A G C T A G G T C A A G T C A G C T A G C T A G C T A C T G T G C A G A T C G T A C A G T C A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGACCC-
TGACCTTTGACCCC
 A G C T C T A G C T A G G T C A A G T C A G C T A G C T A G C T A C T G T G C A G A T C G T A C A G T C A C G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

RXRB/MA0855.1/Jaspar

Match Rank:7
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGACCC-
TGACCTTTGACCCC
 A G C T C T A G C T A G G T C A A G T C A G C T A G C T A G C T A C T G T G C A G A T C G T A C A G T C A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TGGACTTTGACCC-
TGACCTTTGCCCCA
 A G C T C T A G C T A G G T C A A G T C A G C T A G C T A G C T A C T G T G C A G A T C G T A C A G T C A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGACCC-
TGACCTTTGACCTN
 A G C T C T A G C T A G G T C A A G T C A G C T A G C T A G C T A C T G T G C A G A T C G T A C A G T C A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGACCC-
TGACCTTTGCCCTA
 A G C T C T A G C T A G G T C A A G T C A G C T A G C T A G C T A C T G T G C A G A T C G T A C A G T C A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A