p-value: | 1e-6 |
log p-value: | -1.462e+01 |
Information Content per bp: | 1.706 |
Number of Target Sequences with motif | 8.0 |
Percentage of Target Sequences with motif | 1.01% |
Number of Background Sequences with motif | 11.2 |
Percentage of Background Sequences with motif | 0.08% |
Average Position of motif in Targets | 41.2 +/- 25.6bp |
Average Position of motif in Background | 54.2 +/- 27.9bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.29 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | ACSATCCTGACCT -------TGACCT |
|
|
|
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 2 |
Score: | 0.70 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | ACSATCCTGACCT-- -------TGACCTYA |
|
|
|
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 3 |
Score: | 0.69 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | ACSATCCTGACCT-- -------TGACCYCT |
|
|
|
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 4 |
Score: | 0.68 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | ACSATCCTGACCT--- ------CTGACCTTTG |
|
|
|
RORA/MA0071.1/Jaspar
Match Rank: | 5 |
Score: | 0.68 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | ACSATCCTGACCT---- -------TGACCTTGAT |
|
|
|
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 6 |
Score: | 0.64 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | ACSATCCTGACCT--- ------NTGACCTTGA |
|
|
|
NR2F1/MA0017.2/Jaspar
Match Rank: | 7 |
Score: | 0.64 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ACSATCCTGACCT--- ---CNNTTGACCTTTG |
|
|
|
NR4A2/MA0160.1/Jaspar
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | ACSATCCTGACCT- ------GTGACCTT |
|
|
|
ESR2/MA0258.2/Jaspar
Match Rank: | 9 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ACSATCCTGACCT AGGNCANNGTGACCT |
|
|
|
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 10 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACSATCCTGACCT -TGACCTTGACCT |
|
|
|