Information for 15-AAACAATGCG (Motif 29)

C G T A C G T A C G T A G T A C C G T A C G T A A C G T A C T G A G T C A C T G
Reverse Opposite:
T G A C T C A G A G T C G T C A A C G T A C G T A C T G A C G T A C G T A C G T
p-value:1e-7
log p-value:-1.710e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets34.0 +/- 19.4bp
Average Position of motif in Background37.7 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-AAACAATGCG
VRAACAATGG-
 A C G T C G T A C G T A C G T A G T A C C G T A C G T A A C G T A C T G A G T C A C T G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:AAACAATGCG
NAACAAT---
 C G T A C G T A C G T A G T A C C G T A C G T A A C G T A C T G A G T C A C T G
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-AAACAATGCG
AAAACAATGG-
 A C G T C G T A C G T A C G T A G T A C C G T A C G T A A C G T A C T G A G T C A C T G
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--AAACAATGCG
GTAAACAAT---
 A C G T A C G T C G T A C G T A C G T A G T A C C G T A C G T A A C G T A C T G A G T C A C T G
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AAACAATGCG
RAACAATGGN
 C G T A C G T A C G T A G T A C C G T A C G T A A C G T A C T G A G T C A C T G
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:AAACAATGCG
GAACAATGG-
 C G T A C G T A C G T A G T A C C G T A C G T A A C G T A C T G A G T C A C T G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:AAACAATGCG
-AACAAT---
 C G T A C G T A C G T A G T A C C G T A C G T A A C G T A C T G A G T C A C T G
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-AAACAATGCG
VRRACAAWGG-
 A C G T C G T A C G T A C G T A G T A C C G T A C G T A A C G T A C T G A G T C A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-AAACAATGCG
RNAACAATGG-
 A C G T C G T A C G T A C G T A G T A C C G T A C G T A A C G T A C T G A G T C A C T G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AAACAATGCG
GAACAATGGN
 C G T A C G T A C G T A G T A C C G T A C G T A A C G T A C T G A G T C A C T G
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G