Information for 5-TDGGTCTGAGACT (Motif 4)

A C G T C T A G A C T G A T C G A C G T G T A C C G A T A C T G C G T A A C T G C T G A A G T C A G C T
Reverse Opposite:
C T G A T C A G A G C T A G T C C G A T A G T C C G T A C A T G C G T A A T G C G T A C G A T C C G T A
p-value:1e-14
log p-value:-3.328e+01
Information Content per bp:1.772
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.2 +/- 30.1bp
Average Position of motif in Background60.1 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TDGGTCTGAGACT-
-AGGTGNCAGACAG
 A C G T C T A G A C T G A T C G A C G T G T A C C G A T A C T G C G T A A C T G C T G A A G T C A G C T A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TDGGTCTGAGACT-
--GGTTAGAGACCT
 A C G T C T A G A C T G A T C G A C G T G T A C C G A T A C T G C G T A A C T G C T G A A G T C A G C T A C G T
A C G T A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TDGGTCTGAGACT-
AGGGGTCAGAGGTCA
 A C G T A C G T C T A G A C T G A T C G A C G T G T A C C G A T A C T G C G T A A C T G C T G A A G T C A G C T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TDGGTCTGAGACT
-AGGTGHCAGACA
 A C G T C T A G A C T G A T C G A C G T G T A C C G A T A C T G C G T A A C T G C T G A A G T C A G C T
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TDGGTCTGAGACT
-AGGTGTGA----
 A C G T C T A G A C T G A T C G A C G T G T A C C G A T A C T G C G T A A C T G C T G A A G T C A G C T
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TDGGTCTGAGACT
-AGGTGTGA----
 A C G T C T A G A C T G A T C G A C G T G T A C C G A T A C T G C G T A A C T G C T G A A G T C A G C T
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TDGGTCTGAGACT
-AGGTGTGA----
 A C G T C T A G A C T G A T C G A C G T G T A C C G A T A C T G C G T A A C T G C T G A A G T C A G C T
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TDGGTCTGAGACT
TAGGTGTGAAG--
 A C G T C T A G A C T G A T C G A C G T G T A C C G A T A C T G C G T A A C T G C T G A A G T C A G C T
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TDGGTCTGAGACT
KGTTGCTAGGMAACA
 A C G T A C G T A C G T C T A G A C T G A T C G A C G T G T A C C G A T A C T G C G T A A C T G C T G A A G T C A G C T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TDGGTCTGAGACT-
GAGGTCAAAGGTCA
 A C G T C T A G A C T G A T C G A C G T G T A C C G A T A C T G C G T A A C T G C T G A A G T C A G C T A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A