Information for 4-GSTGAGAAAC (Motif 9)

A C T G A T C G A C G T A C T G G T C A T A C G G C T A C G T A C G T A A G T C
Reverse Opposite:
A C T G C G A T G C A T C A G T A G T C A C G T A G T C C G T A A T G C A G T C
p-value:1e-12
log p-value:-2.807e+01
Information Content per bp:1.792
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets39.9 +/- 31.1bp
Average Position of motif in Background46.3 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GSTGAGAAAC--
AGGTGNCAGACAG
 A C G T A C T G A T C G A C G T A C T G G T C A T A C G G C T A C G T A C G T A A G T C A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GSTGAGAAAC-
AGGTGHCAGACA
 A C G T A C T G A T C G A C G T A C T G G T C A T A C G G C T A C G T A C G T A A G T C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GSTGAGAAAC--
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A C T G G T C A T A C G G C T A C G T A C G T A A G T C A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GSTGAGAAAC
AGGTGTGAAA-
 A C G T A C T G A T C G A C G T A C T G G T C A T A C G G C T A C G T A C G T A A G T C
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GSTGAGAAAC
AAGGTGTGAAA-
 A C G T A C G T A C T G A T C G A C G T A C T G G T C A T A C G G C T A C G T A C G T A A G T C
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GSTGAGAAAC-
AAGGTGTGAAAAT
 A C G T A C G T A C T G A T C G A C G T A C T G G T C A T A C G G C T A C G T A C G T A A G T C A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GSTGAGAAAC
AGGTGTGAAM-
 A C G T A C T G A T C G A C G T A C T G G T C A T A C G G C T A C G T A C G T A A G T C
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GSTGAGAAAC
AAGGTGTKAA--
 A C G T A C G T A C T G A T C G A C G T A C T G G T C A T A C G G C T A C G T A C G T A A G T C
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GSTGAGAAAC
AGGTGTTAAT-
 A C G T A C T G A T C G A C G T A C T G G T C A T A C G G C T A C G T A C G T A A G T C
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GSTGAGAAAC
AAGGTGTGAA--
 A C G T A C G T A C T G A T C G A C G T A C T G G T C A T A C G G C T A C G T A C G T A A G T C
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T