Information for 17-AAGATCAGCCCCH (Motif 27)

G T C A C T G A A C T G T C G A A C G T A G T C C G T A A C T G A G T C A G T C A G T C A G T C G C T A
Reverse Opposite:
C A G T A C T G A C T G A C T G A C T G A G T C A C G T A C T G C G T A A G C T A G T C A G C T A C G T
p-value:1e-8
log p-value:-1.882e+01
Information Content per bp:1.868
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.6 +/- 24.8bp
Average Position of motif in Background71.1 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAGATCAGCCCCH-
NAGCCCCGCCCCCN
 G T C A C T G A A C T G T C G A A C G T A G T C C G T A A C T G A G T C A G T C A G T C A G T C G C T A A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGATCAGCCCCH
-GGCCCCGCCCCC
 G T C A C T G A A C T G T C G A A C G T A G T C C G T A A C T G A G T C A G T C A G T C A G T C G C T A
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGATCAGCCCCH----
-ATCCCCGCCCCTAAAA
 G T C A C T G A A C T G T C G A A C G T A G T C C G T A A C T G A G T C A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T
A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAGATCAGCCCCH-
--GCTCCGCCCMCY
 G T C A C T G A A C T G T C G A A C G T A G T C C G T A A C T G A G T C A G T C A G T C A G T C G C T A A C G T
A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AAGATCAGCCCCH
---ATCACCCCAT
 G T C A C T G A A C T G T C G A A C G T A G T C C G T A A C T G A G T C A G T C A G T C A G T C G C T A
A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAGATCAGCCCCH-
GNNAGCTAATCCCCCN
 A C G T A C G T G T C A C T G A A C T G T C G A A C G T A G T C C G T A A C T G A G T C A G T C A G T C A G T C G C T A A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGATCAGCCCCH
AAGGTCAC-----
 G T C A C T G A A C T G T C G A A C G T A G T C C G T A A C T G A G T C A G T C A G T C A G T C G C T A
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAGATCAGCCCCH
CAAAGGTCAG-----
 A C G T A C G T G T C A C T G A A C T G T C G A A C G T A G T C C G T A A C T G A G T C A G T C A G T C A G T C G C T A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AAGATCAGCCCCH
-----CAGCC---
 G T C A C T G A A C T G T C G A A C G T A G T C C G T A A C T G A G T C A G T C A G T C A G T C G C T A
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAGATCAGCCCCH
-CNGTCACGCCAC
 G T C A C T G A A C T G T C G A A C G T A G T C C G T A A C T G A G T C A G T C A G T C A G T C G C T A
A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C