Information for 5-AGGGGCWGCCDGGCTG (Motif 14)

T C G A A C T G C A T G A T C G C T A G A T G C C G T A A T C G G T A C G T A C C A G T A C T G A T C G A G T C C G A T C T A G
Reverse Opposite:
A G T C C G T A A C T G A T G C A G T C G C T A C A T G A C T G A T G C C G A T A T C G A G T C A T G C G A T C G T A C A G C T
p-value:1e-10
log p-value:-2.460e+01
Information Content per bp:1.760
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.2 +/- 25.0bp
Average Position of motif in Background59.7 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGGGGCWGCCDGGCTG
--TGGCAGNCTGCCAG
 T C G A A C T G C A T G A T C G C T A G A T G C C G T A A T C G G T A C G T A C C A G T A C T G A T C G A G T C C G A T C T A G
A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PB0202.1_Zfp410_2/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGCWGCCDGGCTG
NNTNNGGGGCGGNGNGN---
 A C G T A C G T A C G T A C G T T C G A A C T G C A T G A T C G C T A G A T G C C G T A A T C G G T A C G T A C C A G T A C T G A T C G A G T C C G A T C T A G
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.53
Offset:9
Orientation:forward strand
Alignment:AGGGGCWGCCDGGCTG-
---------TWGTCTGV
 T C G A A C T G C A T G A T C G C T A G A T G C C G T A A T C G G T A C G T A C C A G T A C T G A T C G A G T C C G A T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGCWGCCDGGCTG
NNTNAGGGGCGGNNNN----
 A C G T A C G T A C G T A C G T T C G A A C T G C A T G A T C G C T A G A T G C C G T A A T C G G T A C G T A C C A G T A C T G A T C G A G T C C G A T C T A G
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGGGGCWGCCDGGCTG-
--GTCATGCHTGRCTGS
 T C G A A C T G C A T G A T C G C T A G A T G C C G T A A T C G G T A C G T A C C A G T A C T G A T C G A G T C C G A T C T A G A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.52
Offset:11
Orientation:reverse strand
Alignment:AGGGGCWGCCDGGCTG
-----------NGCTN
 T C G A A C T G C A T G A T C G C T A G A T G C C G T A A T C G G T A C G T A C C A G T A C T G A T C G A G T C C G A T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.51
Offset:12
Orientation:forward strand
Alignment:AGGGGCWGCCDGGCTG--
------------GCTGTG
 T C G A A C T G C A T G A T C G C T A G A T G C C G T A A T C G G T A C G T A C C A G T A C T G A T C G A G T C C G A T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AGGGGCWGCCDGGCTG-
-TTGGCANNNTGCCAAG
 T C G A A C T G C A T G A T C G C T A G A T G C C G T A A T C G G T A C G T A C C A G T A C T G A T C G A G T C C G A T C T A G A C G T
A C G T G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGGGGCWGCCDGGCTG---
----GGGGCTYGKCTGGGA
 T C G A A C T G C A T G A T C G C T A G A T G C C G T A A T C G G T A C G T A C C A G T A C T G A T C G A G T C C G A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:AGGGGCWGCCDGGCTG
---AGGTGNCAGACAG
 T C G A A C T G C A T G A T C G C T A G A T G C C G T A A T C G G T A C G T A C C A G T A C T G A T C G A G T C C G A T C T A G
A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G